Strain Fitness in Escherichia coli BW25113 around b0508

Experiment: 3hr_MSC_rep1_highinoculum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3hr_MSC_rep1_highinoculum
533,996	-	gcl	b0507	0.48	+0.0
534,135	+	gcl	b0507	0.56	-0.2
534,199	-	gcl	b0507	0.59	+0.3
534,217	-	gcl	b0507	0.60	-0.7
534,263	+	gcl	b0507	0.63	-0.2
534,279	-	gcl	b0507	0.64	-0.2
534,279	-	gcl	b0507	0.64	+0.6
534,281	-	gcl	b0507	0.64	+0.1
534,314	+	gcl	b0507	0.66	-0.1
534,539	+	gcl	b0507	0.79	-0.1
534,539	+	gcl	b0507	0.79	+0.6
534,544	-	gcl	b0507	0.79	-2.1
534,557	+	gcl	b0507	0.80	+0.5
534,557	+	gcl	b0507	0.80	-0.9
534,571	-	gcl	b0507	0.80	+0.9
534,661	+	gcl	b0507	0.85	-0.2
534,670	-	gcl	b0507	0.86	+2.6
534,672	+	gcl	b0507	0.86	-0.0
534,696	+	gcl	b0507	0.87	+0.5
534,740	+	gcl	b0507	0.90	-0.8
534,740	+	gcl	b0507	0.90	-1.6
534,740	+	gcl	b0507	0.90	-0.0
534,756	+				-0.3
534,756	+				-0.2
534,830	+				-0.3
534,830	+				-0.8
534,830	+				+0.5
534,833	+				-0.3
534,833	+				-0.4
534,835	+				+0.8
534,835	+				+0.2
534,843	-				+2.6
534,865	+				+0.0
534,868	+				-0.3
534,868	+				+0.2
534,868	+				+0.6
534,878	+				-0.8
534,878	+				-1.1
534,889	+				-1.0
534,891	+				-0.1
534,891	+				-0.2
534,892	+				+0.3
534,892	+				+0.8
534,899	-				+2.6
534,911	+				-0.1
534,912	+				+0.1
534,912	+				-0.1
535,001	+				+1.2
535,011	+				+0.3
535,128	-	hyi	b0508	0.25	+0.6
535,143	-	hyi	b0508	0.27	+0.6
535,159	+	hyi	b0508	0.29	+1.6
535,162	-	hyi	b0508	0.29	+2.6
535,162	-	hyi	b0508	0.29	+2.6
535,207	+	hyi	b0508	0.35	-2.1
535,207	+	hyi	b0508	0.35	+0.5
535,207	+	hyi	b0508	0.35	+1.6
535,214	+	hyi	b0508	0.36	-0.6
535,214	+	hyi	b0508	0.36	-0.2
535,267	+	hyi	b0508	0.43	-0.7
535,356	+	hyi	b0508	0.54	+0.3
535,403	+	hyi	b0508	0.60	-0.7
535,435	+	hyi	b0508	0.64	-1.3
535,485	+	hyi	b0508	0.71	+2.6
535,511	+	hyi	b0508	0.74	-0.0
535,532	-	hyi	b0508	0.77	+2.6
535,681	+				+0.5
535,686	+				+0.4
535,691	+				-0.1
535,691	+				-1.6
535,696	+				+1.1
535,704	-				-0.8
535,717	+				-0.0
535,717	+				-0.0
535,722	+				-0.1
535,759	-				+0.6
535,759	-				+2.1
535,760	+				+0.6
535,760	+				+0.2
535,760	+				+0.2
535,841	+				+5.0
535,849	-				+0.1
535,860	-				-1.5
535,882	+				-0.5
535,890	-				+0.6
535,892	-				+0.1
535,952	-	glxR	b0509	0.16	+0.3
535,967	-	glxR	b0509	0.18	+0.6
535,969	-	glxR	b0509	0.18	+0.1
535,998	+	glxR	b0509	0.21	+0.4
536,006	+	glxR	b0509	0.22	+0.2
536,007	+	glxR	b0509	0.22	+0.1
536,007	+	glxR	b0509	0.22	+0.3
536,048	-	glxR	b0509	0.27	-0.5
536,128	+	glxR	b0509	0.36	-0.4
536,174	+	glxR	b0509	0.41	-0.3
536,187	+	glxR	b0509	0.43	-0.0
536,195	-	glxR	b0509	0.44	-0.9
536,295	-	glxR	b0509	0.55	+1.3
536,308	-	glxR	b0509	0.57	-0.1
536,393	-	glxR	b0509	0.66	+1.1
536,429	+	glxR	b0509	0.70	-0.4
536,492	-	glxR	b0509	0.78	+1.3
536,522	+	glxR	b0509	0.81	-0.2
536,533	+	glxR	b0509	0.82	-0.1
536,533	+	glxR	b0509	0.82	+0.1
536,536	-	glxR	b0509	0.83	+2.6
536,595	+	glxR	b0509	0.89	+0.1
536,595	+	glxR	b0509	0.89	-0.5
536,626	+				-0.2
536,626	+				-0.2
536,631	+				+0.5
536,636	+				+0.2
536,637	-				+2.6
536,639	+				-0.3
536,641	+				+0.4
536,641	+				-0.2
536,641	+				-0.2
536,641	+				+0.1
536,658	+				-0.3
536,658	+				+0.6
536,672	+				-0.2
536,672	+				+0.2
536,672	+				-0.1
536,672	+				+0.3
536,672	+				+0.1
536,672	+				-0.2
536,672	+				-0.3
536,672	+				-0.1
536,672	+				-0.1
536,672	+				-0.0
536,672	+				-0.3
536,672	+				-0.3
536,672	+				+0.5
536,672	+				-1.3
536,673	+				-0.1