Experiment: Time6-phageFRS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_24550 and PS417_24555 are separated by 250 nucleotides PS417_24555 and PS417_24560 are separated by 15 nucleotides PS417_24560 and PS417_24565 overlap by 4 nucleotides
PS417_24550: PS417_24550 - ATP-dependent helicase, at 5,326,064 to 5,328,574
_24550
PS417_24555: PS417_24555 - polyribonucleotide nucleotidyltransferase, at 5,328,825 to 5,329,244
_24555
PS417_24560: PS417_24560 - ferrous iron transporter, at 5,329,260 to 5,330,153
_24560
PS417_24565: PS417_24565 - hypothetical protein, at 5,330,150 to 5,331,196
_24565
Position (kb)
5328
5329
5330 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 5328.602 kb on + strand at 5328.719 kb on + strand at 5328.761 kb on + strand at 5328.782 kb on + strand at 5328.782 kb on + strand at 5328.783 kb on - strand at 5328.790 kb on + strand at 5328.791 kb on - strand at 5328.791 kb on - strand at 5328.791 kb on - strand at 5328.791 kb on - strand at 5328.792 kb on + strand at 5328.792 kb on + strand at 5328.792 kb on + strand at 5328.793 kb on - strand at 5328.793 kb on - strand at 5328.793 kb on - strand at 5328.793 kb on - strand at 5328.793 kb on - strand at 5328.793 kb on - strand at 5328.793 kb on - strand at 5328.793 kb on - strand at 5328.793 kb on - strand at 5328.825 kb on - strand at 5328.984 kb on + strand, within PS417_24555 at 5328.984 kb on + strand, within PS417_24555 at 5328.985 kb on - strand, within PS417_24555 at 5328.985 kb on - strand, within PS417_24555 at 5329.035 kb on - strand, within PS417_24555 at 5329.038 kb on + strand, within PS417_24555 at 5329.039 kb on - strand, within PS417_24555 at 5329.260 kb on - strand at 5329.532 kb on + strand, within PS417_24560 at 5329.651 kb on + strand, within PS417_24560 at 5329.657 kb on + strand, within PS417_24560 at 5329.726 kb on - strand, within PS417_24560 at 5329.831 kb on - strand, within PS417_24560 at 5329.831 kb on - strand, within PS417_24560 at 5329.831 kb on - strand, within PS417_24560 at 5330.105 kb on - strand at 5330.151 kb on + strand at 5330.152 kb on - strand at 5330.154 kb on + strand at 5330.155 kb on - strand at 5330.235 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Time6-phageFRS remove 5,328,602 + -0.0 5,328,719 + -0.8 5,328,761 + -2.8 5,328,782 + -0.6 5,328,782 + -0.0 5,328,783 - -0.7 5,328,790 + -0.9 5,328,791 - -1.5 5,328,791 - +1.7 5,328,791 - -1.7 5,328,791 - +0.2 5,328,792 + -0.1 5,328,792 + +0.9 5,328,792 + +1.1 5,328,793 - -1.0 5,328,793 - +2.7 5,328,793 - +1.1 5,328,793 - +1.7 5,328,793 - -0.3 5,328,793 - -0.3 5,328,793 - +0.2 5,328,793 - -0.4 5,328,793 - +1.1 5,328,825 - -0.7 5,328,984 + PS417_24555 0.38 -0.1 5,328,984 + PS417_24555 0.38 +1.7 5,328,985 - PS417_24555 0.38 -0.3 5,328,985 - PS417_24555 0.38 -0.2 5,329,035 - PS417_24555 0.50 -1.7 5,329,038 + PS417_24555 0.51 -1.2 5,329,039 - PS417_24555 0.51 -1.1 5,329,260 - +0.5 5,329,532 + PS417_24560 0.30 +0.0 5,329,651 + PS417_24560 0.44 +4.0 5,329,657 + PS417_24560 0.44 -1.7 5,329,726 - PS417_24560 0.52 +0.1 5,329,831 - PS417_24560 0.64 +2.1 5,329,831 - PS417_24560 0.64 -1.3 5,329,831 - PS417_24560 0.64 -0.0 5,330,105 - +1.7 5,330,151 + -1.9 5,330,152 - -0.3 5,330,154 + +1.3 5,330,155 - +0.7 5,330,235 + +0.3
Or see this region's nucleotide sequence