Strain Fitness in Pseudomonas simiae WCS417 around PS417_00040

Experiment: TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2
7,543	-				-0.4
7,543	-				-0.4
7,543	-				-0.1
7,543	-				+0.5
7,620	+		PS417_00035	0.11	+0.2
7,621	-		PS417_00035	0.12	+0.3
7,621	-		PS417_00035	0.12	-0.6
7,908	+		PS417_00035	0.43	+0.3
7,909	-		PS417_00035	0.43	-0.4
7,909	-		PS417_00035	0.43	-1.2
8,202	+		PS417_00035	0.75	-0.5
8,203	-		PS417_00035	0.75	-0.6
8,270	+		PS417_00035	0.82	-0.1
8,334	+		PS417_00035	0.89	-0.1
8,391	+				+0.3
8,392	-				+0.3
8,392	-				+0.4
8,403	+				-0.7
8,403	+				+0.1
8,403	+				-0.4
8,403	+				-0.2
8,403	+				-0.1
8,404	-				+0.6
8,404	-				-0.0
8,404	-				-0.2
8,404	-				-0.3
8,404	-				+0.1
8,404	-				+0.0
8,471	+				-0.4
8,471	+				-0.2
8,472	-				-1.0
8,528	-				+0.2
8,528	-				+0.2
8,592	+				-0.9
8,593	-				+0.0
8,871	+		PS417_00040	0.19	+0.7
8,872	-		PS417_00040	0.19	+0.0
9,027	+		PS417_00040	0.26	-0.0
9,156	+		PS417_00040	0.32	+0.6
9,197	-		PS417_00040	0.33	-0.0
9,197	-		PS417_00040	0.33	-0.9
9,298	+		PS417_00040	0.38	+0.5
9,298	+		PS417_00040	0.38	+0.4
9,299	-		PS417_00040	0.38	-0.3
9,543	+		PS417_00040	0.49	-0.1
9,670	+		PS417_00040	0.54	+0.0
9,795	-		PS417_00040	0.60	-0.2
9,935	-		PS417_00040	0.66	-1.9
9,935	-		PS417_00040	0.66	-0.4
10,043	+		PS417_00040	0.70	+0.5
10,175	-		PS417_00040	0.76	-0.0
10,175	-		PS417_00040	0.76	-0.4
10,275	-		PS417_00040	0.81	+0.7
10,275	-		PS417_00040	0.81	-0.2
10,275	-		PS417_00040	0.81	-0.1
10,303	+		PS417_00040	0.82	-0.5
10,323	-		PS417_00040	0.83	-0.0
10,328	+		PS417_00040	0.83	+0.8
10,328	+		PS417_00040	0.83	+0.2
10,434	+		PS417_00040	0.88	-0.8
10,435	-		PS417_00040	0.88	-0.6
10,435	-		PS417_00040	0.88	+0.9
10,472	+		PS417_00040	0.89	-0.2
10,627	+				+0.0
10,741	-				-0.4
10,900	-				+0.9
10,900	-				+0.5
11,028	+		PS417_00045	0.17	-2.5
11,679	-				-2.5
11,679	-				+0.2