Experiment: TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03615 and PS417_03620 overlap by 8 nucleotides PS417_03620 and PS417_03625 are separated by 112 nucleotides PS417_03625 and PS417_03630 are separated by 136 nucleotides PS417_03630 and PS417_03635 are separated by 137 nucleotides PS417_03635 and PS417_03640 overlap by 8 nucleotides
PS417_03615: PS417_03615 - molybdopterin-synthase adenylyltransferase, at 821,932 to 822,687
_03615
PS417_03620: PS417_03620 - glutamate racemase, at 822,680 to 823,474
_03620
PS417_03625: PS417_03625 - lipid A 3-O-deacylase, at 823,587 to 824,105
_03625
PS417_03630: PS417_03630 - hypothetical protein, at 824,242 to 824,463
_03630
PS417_03635: PS417_03635 - membrane protein, at 824,601 to 825,080
_03635
PS417_03640: PS417_03640 - cyclopropane-fatty-acyl-phospholipid synthase, at 825,073 to 826,344
_03640
Position (kb)
823
824
825 Strain fitness (log2 ratio)
-1
0
1 at 823.435 kb on - strand at 823.531 kb on + strand at 823.531 kb on + strand at 823.532 kb on - strand at 823.532 kb on - strand at 823.541 kb on + strand at 823.549 kb on - strand at 823.549 kb on - strand at 823.560 kb on + strand at 823.560 kb on + strand at 823.560 kb on + strand at 823.560 kb on + strand at 823.734 kb on - strand, within PS417_03625 at 823.795 kb on - strand, within PS417_03625 at 823.795 kb on - strand, within PS417_03625 at 823.884 kb on + strand, within PS417_03625 at 823.884 kb on + strand, within PS417_03625 at 823.884 kb on + strand, within PS417_03625 at 823.885 kb on - strand, within PS417_03625 at 823.885 kb on - strand, within PS417_03625 at 823.885 kb on - strand, within PS417_03625 at 823.886 kb on + strand, within PS417_03625 at 823.886 kb on + strand, within PS417_03625 at 823.886 kb on + strand, within PS417_03625 at 824.076 kb on + strand at 824.076 kb on + strand at 824.077 kb on - strand at 824.088 kb on + strand at 824.089 kb on - strand at 824.089 kb on - strand at 824.104 kb on - strand at 824.170 kb on + strand at 824.185 kb on + strand at 824.186 kb on - strand at 824.221 kb on - strand at 824.340 kb on + strand, within PS417_03630 at 824.340 kb on + strand, within PS417_03630 at 824.341 kb on - strand, within PS417_03630 at 824.341 kb on - strand, within PS417_03630 at 824.428 kb on - strand, within PS417_03630 at 824.429 kb on + strand, within PS417_03630 at 824.560 kb on - strand at 824.560 kb on - strand at 824.575 kb on + strand at 824.576 kb on - strand at 824.625 kb on + strand at 824.625 kb on + strand at 824.911 kb on - strand, within PS417_03635 at 824.959 kb on - strand, within PS417_03635 at 825.075 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2 remove 823,435 - -1.0 823,531 + +1.6 823,531 + -0.2 823,532 - -0.6 823,532 - -0.4 823,541 + -0.1 823,549 - +0.4 823,549 - -0.3 823,560 + +0.9 823,560 + +0.7 823,560 + +0.6 823,560 + +0.7 823,734 - PS417_03625 0.28 -0.1 823,795 - PS417_03625 0.40 -0.2 823,795 - PS417_03625 0.40 -0.8 823,884 + PS417_03625 0.57 -0.8 823,884 + PS417_03625 0.57 -0.4 823,884 + PS417_03625 0.57 -1.2 823,885 - PS417_03625 0.57 -1.3 823,885 - PS417_03625 0.57 +0.1 823,885 - PS417_03625 0.57 -0.5 823,886 + PS417_03625 0.58 -0.9 823,886 + PS417_03625 0.58 -0.6 823,886 + PS417_03625 0.58 +0.5 824,076 + -0.1 824,076 + -1.3 824,077 - +0.3 824,088 + -1.5 824,089 - +0.1 824,089 - -0.7 824,104 - +0.6 824,170 + -0.1 824,185 + -0.1 824,186 - -0.1 824,221 - -0.7 824,340 + PS417_03630 0.44 -0.7 824,340 + PS417_03630 0.44 -0.1 824,341 - PS417_03630 0.45 -0.6 824,341 - PS417_03630 0.45 +0.0 824,428 - PS417_03630 0.84 +0.5 824,429 + PS417_03630 0.84 -0.5 824,560 - +0.4 824,560 - -0.6 824,575 + -0.2 824,576 - -0.3 824,625 + +0.1 824,625 + +0.8 824,911 - PS417_03635 0.65 +1.0 824,959 - PS417_03635 0.75 -0.2 825,075 - -0.0
Or see this region's nucleotide sequence