Strain Fitness in Pseudomonas simiae WCS417 around PS417_21670

Experiment: TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2
4,699,640	+		PS417_21665	0.48	-0.1
4,699,723	+		PS417_21665	0.57	-0.4
4,699,892	+		PS417_21665	0.74	+0.4
4,699,893	-		PS417_21665	0.74	-0.4
4,699,898	+		PS417_21665	0.74	-0.0
4,699,898	+		PS417_21665	0.74	-0.3
4,699,899	-		PS417_21665	0.74	-0.2
4,699,899	-		PS417_21665	0.74	+0.1
4,699,903	-		PS417_21665	0.75	-0.2
4,699,926	-		PS417_21665	0.77	+0.1
4,700,064	-				-0.1
4,700,191	+				-1.7
4,700,272	+				-0.2
4,700,272	+				+0.1
4,700,272	+				-0.2
4,700,272	+				+0.2
4,700,402	+				-1.4
4,700,402	+				-0.2
4,700,403	-				+0.3
4,700,403	-				+0.4
4,700,492	+				+0.7
4,700,492	+				+0.3
4,700,492	+				-0.1
4,700,525	+				-0.9
4,700,525	+				+0.0
4,700,525	+				+0.3
4,700,526	-				-0.6
4,700,526	-				+0.4
4,700,526	-				-0.1
4,700,540	+				+0.1
4,700,540	+				-0.2
4,700,540	+				-0.1
4,700,540	+				+0.1
4,700,541	-				-0.6
4,700,541	-				-0.1
4,700,541	-				+0.9
4,700,559	+				+0.3
4,700,880	+		PS417_21670	0.53	-0.5
4,700,881	-		PS417_21670	0.53	-0.1
4,701,053	+		PS417_21670	0.87	-0.0
4,701,053	+		PS417_21670	0.87	-0.7
4,701,053	+		PS417_21670	0.87	-1.6
4,701,053	+		PS417_21670	0.87	-0.3
4,701,054	-		PS417_21670	0.87	-0.4
4,701,198	-				-0.0
4,701,201	+				-0.1
4,701,201	+				+0.1
4,701,201	+				+0.1
4,701,202	-				-0.7
4,701,202	-				-0.1
4,701,202	-				-0.5
4,701,202	-				-0.1
4,701,202	-				+0.6
4,701,234	+				-0.1
4,701,266	-				-0.3
4,701,272	+				-0.1
4,701,273	-				+0.1
4,701,276	+				-0.1
4,701,277	-				-0.2
4,701,277	-				-0.6
4,701,310	-				-0.0
4,701,323	-				-0.0
4,701,331	+				-0.4
4,701,543	+		PS417_21675	0.16	+0.2
4,701,544	-		PS417_21675	0.16	-0.1
4,701,544	-		PS417_21675	0.16	-0.4
4,701,544	-		PS417_21675	0.16	+0.1
4,701,544	-		PS417_21675	0.16	-0.3
4,701,544	-		PS417_21675	0.16	+0.8
4,701,876	-		PS417_21675	0.38	+0.2
4,701,876	-		PS417_21675	0.38	+0.6
4,701,912	+		PS417_21675	0.40	-1.1
4,701,913	-		PS417_21675	0.40	-0.5
4,701,913	-		PS417_21675	0.40	-0.1
4,701,937	+		PS417_21675	0.42	+0.1