Strain Fitness in Pseudomonas simiae WCS417 around PS417_16975

Experiment: TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1
3,707,164	-		PS417_16970	0.49	-0.4
3,707,508	+		PS417_16970	0.68	+0.8
3,707,831	+		PS417_16970	0.87	+0.3
3,707,832	-		PS417_16970	0.87	-0.1
3,708,032	-				-1.7
3,708,065	+				+0.1
3,708,066	-				+0.2
3,708,115	+				+0.5
3,708,115	+				-0.2
3,708,116	-				-0.2
3,708,118	+				-0.0
3,708,118	+				+0.1
3,708,118	+				+0.1
3,708,135	+				-0.6
3,708,223	+		PS417_16975	0.16	-0.2
3,708,223	+		PS417_16975	0.16	+0.3
3,708,224	-		PS417_16975	0.16	-0.2
3,708,224	-		PS417_16975	0.16	-1.1
3,708,629	-		PS417_16975	0.79	-0.8
3,708,689	-		PS417_16975	0.88	-3.1
3,708,809	+				+0.2
3,708,822	+				-0.4
3,708,823	-				-0.1
3,708,850	-				+0.1
3,708,900	+				+0.5
3,709,076	-		PS417_16980	0.17	-0.6
3,709,076	-		PS417_16980	0.17	+0.4
3,709,101	+		PS417_16980	0.20	-1.0
3,709,102	-		PS417_16980	0.20	-0.1
3,709,102	-		PS417_16980	0.20	-0.0
3,709,102	-		PS417_16980	0.20	-0.2
3,709,209	-		PS417_16980	0.34	+0.4
3,709,209	-				+2.0
3,709,323	+		PS417_16980	0.48	+0.7