Strain Fitness in Pseudomonas simiae WCS417 around PS417_13100

Experiment: TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1
2,860,908	+		PS417_13095	0.32	-0.3
2,860,909	-		PS417_13095	0.32	-0.3
2,860,909	-		PS417_13095	0.32	+0.1
2,860,929	+		PS417_13095	0.34	-0.8
2,860,958	+		PS417_13095	0.36	+0.6
2,860,988	+		PS417_13095	0.39	-0.1
2,860,991	+		PS417_13095	0.39	-0.3
2,861,001	+				+0.1
2,861,064	+		PS417_13095	0.45	-0.1
2,861,187	-		PS417_13095	0.56	-4.1
2,861,405	-		PS417_13095	0.74	-0.1
2,861,534	+		PS417_13095	0.85	+0.1
2,861,595	-				-1.5
2,861,595	-				+0.7
2,861,648	+				-0.2
2,861,780	+				-0.5
2,861,781	-				-1.4
2,861,783	+				-0.1
2,861,838	-				-0.2
2,861,902	+				+0.4
2,861,902	+				-0.1
2,861,903	-				+0.4
2,861,911	+				+0.2
2,861,912	-				+1.1
2,862,020	-				+0.1
2,862,302	-		PS417_13100	0.27	-0.6
2,862,742	+		PS417_13100	0.55	-3.3
2,862,742	+		PS417_13100	0.55	-1.3
2,862,752	-		PS417_13100	0.55	+1.0
2,862,969	+		PS417_13100	0.69	+0.5
2,863,032	-		PS417_13100	0.73	+0.4
2,863,153	+		PS417_13100	0.81	-0.1
2,863,154	-		PS417_13100	0.81	+0.9
2,863,157	+		PS417_13100	0.81	+0.4
2,863,157	+		PS417_13100	0.81	-0.1
2,863,269	+		PS417_13100	0.88	-0.7
2,863,269	+				+1.4
2,863,269	+		PS417_13100	0.88	+0.6
2,863,600	-				+0.2
2,863,600	-				-0.1
2,863,600	-				-0.1
2,863,600	-				-2.8
2,863,617	+				+0.4
2,863,617	+				-0.8
2,863,617	+				-0.9
2,863,617	+				-0.4
2,863,618	-				+0.5
2,863,618	-				+0.6
2,863,618	-				-0.0
2,863,618	-				-0.8
2,863,618	-				+0.3
2,863,935	+				-0.5
2,863,935	+		PS417_13105	0.27	-0.3
2,863,936	-		PS417_13105	0.27	-0.2
2,863,938	-		PS417_13105	0.27	+0.5
2,863,938	-		PS417_13105	0.27	+0.1
2,864,339	+		PS417_13105	0.59	-0.0
2,864,366	+		PS417_13105	0.62	-0.6
2,864,366	+		PS417_13105	0.62	-0.3
2,864,366	+		PS417_13105	0.62	-0.1
2,864,366	+		PS417_13105	0.62	-2.0