Strain Fitness in Pseudomonas simiae WCS417 around PS417_09145

Experiment: TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1
1,986,758	+				-0.3
1,986,759	-				-0.5
1,987,176	+		PS417_09140	0.56	+0.7
1,987,176	+		PS417_09140	0.56	-0.3
1,987,177	-		PS417_09140	0.56	+0.3
1,987,355	+		PS417_09140	0.84	+0.5
1,987,355	+		PS417_09140	0.84	-1.1
1,987,356	-		PS417_09140	0.84	-0.4
1,987,416	+				-0.3
1,987,416	+				+1.0
1,987,417	-				+0.1
1,987,417	-				-0.1
1,987,417	-				+0.1
1,987,417	-				+0.2
1,987,425	+				-0.2
1,987,425	+				-0.4
1,987,425	+				+0.3
1,987,478	+				-0.1
1,987,529	+				+0.5
1,987,530	-				+0.3
1,987,530	-				-0.7
1,987,587	-				+0.3
1,987,677	-				-0.0
1,987,743	-		PS417_09145	0.12	-0.3
1,987,757	+		PS417_09145	0.12	+0.0
1,987,758	-		PS417_09145	0.12	-0.3
1,987,883	+		PS417_09145	0.18	-1.1
1,987,884	-		PS417_09145	0.18	+0.2
1,987,925	+		PS417_09145	0.20	-0.3
1,987,925	+		PS417_09145	0.20	+0.2
1,987,925	+		PS417_09145	0.20	-0.1
1,987,925	+				+1.4
1,987,926	-		PS417_09145	0.20	-0.2
1,987,934	+		PS417_09145	0.20	-0.6
1,987,934	+		PS417_09145	0.20	-1.5
1,987,935	-		PS417_09145	0.20	+0.4
1,987,937	+				-0.9
1,987,938	-		PS417_09145	0.20	-0.6
1,987,938	-		PS417_09145	0.20	-0.5
1,988,186	+		PS417_09145	0.31	-0.1
1,988,222	+		PS417_09145	0.33	+0.6
1,988,672	+		PS417_09145	0.52	-1.2
1,988,672	+		PS417_09145	0.52	-1.1
1,988,673	-		PS417_09145	0.52	-0.1
1,988,705	+		PS417_09145	0.54	-0.7
1,988,706	-		PS417_09145	0.54	-0.4
1,988,810	+		PS417_09145	0.58	-0.1
1,988,811	-		PS417_09145	0.58	-0.9
1,988,814	-		PS417_09145	0.59	-0.6
1,988,910	-		PS417_09145	0.63	-0.7
1,988,912	+		PS417_09145	0.63	+0.1
1,988,921	+		PS417_09145	0.63	+0.0
1,988,922	-				+1.2
1,988,944	-		PS417_09145	0.64	+1.0
1,988,987	+		PS417_09145	0.66	+0.2
1,989,011	+				+0.5
1,989,011	+		PS417_09145	0.67	-0.1
1,989,012	+		PS417_09145	0.67	-0.5
1,989,036	-		PS417_09145	0.68	-0.4
1,989,398	+		PS417_09145	0.84	+0.2
1,989,398	+		PS417_09145	0.84	+0.5
1,989,399	-		PS417_09145	0.84	-1.9
1,989,786	-				+0.1
1,989,797	+				-0.0
1,989,797	+				-0.4
1,990,037	+		PS417_09150	0.35	-0.2
1,990,038	-		PS417_09150	0.35	-0.1
1,990,038	-		PS417_09150	0.35	-0.7
1,990,102	-				-0.4
1,990,102	-		PS417_09150	0.44	-0.5
1,990,504	+				-1.9
1,990,508	+				+0.2
1,990,508	+				-0.3
1,990,508	+				+0.0
1,990,508	+				+0.7
1,990,509	-				-0.3
1,990,509	-				+1.0
1,990,523	+				-0.0
1,990,523	+				-0.3