Strain Fitness in Pseudomonas simiae WCS417 around PS417_11835

Experiment: TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1
2,574,325	+		PS417_11830	0.33	+0.9
2,574,526	+		PS417_11830	0.55	-0.0
2,574,526	+		PS417_11830	0.55	+0.1
2,574,656	-		PS417_11830	0.69	-0.0
2,574,727	+		PS417_11830	0.77	-1.0
2,574,905	-				-0.7
2,574,905	-				+0.3
2,574,905	-				-0.6
2,574,905	-				+0.3
2,574,905	-				-0.3
2,574,905	-				+0.8
2,574,905	-				-0.7
2,575,071	+				+0.0
2,575,299	+		PS417_11835	0.20	-0.1
2,575,321	+		PS417_11835	0.22	-0.5
2,575,515	-		PS417_11835	0.38	-0.2
2,575,570	-		PS417_11835	0.43	-0.2
2,575,589	+		PS417_11835	0.44	-1.2
2,575,718	+		PS417_11835	0.55	+0.1
2,575,719	-		PS417_11835	0.55	-0.2
2,575,887	-		PS417_11835	0.69	+0.4
2,576,009	+		PS417_11835	0.79	+0.3
2,576,010	-		PS417_11835	0.79	+0.9
2,576,010	-		PS417_11835	0.79	-0.2
2,576,102	+		PS417_11835	0.87	+0.4
2,576,102	+		PS417_11835	0.87	-0.4
2,576,103	-		PS417_11835	0.87	-0.2
2,576,299	-				+0.1
2,576,304	+				-1.0
2,576,305	-				-0.1
2,576,574	+		PS417_11840	0.15	-0.5
2,576,575	-		PS417_11840	0.16	-1.1
2,576,578	+				+1.8
2,576,578	+		PS417_11840	0.16	+0.4
2,576,579	-		PS417_11840	0.16	-0.7
2,576,659	+		PS417_11840	0.22	-0.2
2,576,659	+		PS417_11840	0.22	+1.3
2,576,659	+		PS417_11840	0.22	-1.1
2,576,659	+		PS417_11840	0.22	-0.1
2,576,660	-		PS417_11840	0.22	+0.2
2,576,865	+		PS417_11840	0.36	+0.4
2,576,866	-		PS417_11840	0.36	+0.5
2,576,960	-		PS417_11840	0.43	+1.0
2,577,001	-		PS417_11840	0.46	+0.6
2,577,050	+		PS417_11840	0.49	-0.0
2,577,112	-		PS417_11840	0.54	-2.7
2,577,234	+		PS417_11840	0.62	-0.8
2,577,234	+		PS417_11840	0.62	+0.4
2,577,241	-				-0.2