Strain Fitness in Pseudomonas simiae WCS417 around PS417_06020

Experiment: TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1
1,337,160	-		PS417_06010	0.87	-0.1
1,337,225	+				+0.6
1,337,274	+				+2.8
1,337,274	+				+0.5
1,337,424	-				-0.3
1,337,587	+		PS417_06015	0.34	-0.6
1,337,587	+		PS417_06015	0.34	+1.7
1,337,588	-		PS417_06015	0.34	+0.1
1,337,589	+		PS417_06015	0.34	-0.0
1,337,590	-		PS417_06015	0.34	+0.0
1,337,607	+		PS417_06015	0.38	-0.1
1,337,608	-		PS417_06015	0.38	+0.4
1,337,635	+		PS417_06015	0.43	-1.7
1,337,635	+		PS417_06015	0.43	-0.9
1,337,635	+		PS417_06015	0.43	+0.5
1,337,635	+		PS417_06015	0.43	+1.2
1,337,636	-		PS417_06015	0.43	-0.4
1,337,643	+				-0.2
1,337,644	-		PS417_06015	0.44	-0.5
1,337,671	+		PS417_06015	0.49	+0.1
1,337,758	+		PS417_06015	0.65	-0.5
1,337,759	-		PS417_06015	0.65	-1.4
1,337,910	-				+0.9
1,337,947	+				-0.7
1,337,947	+				-0.3
1,337,948	-				-0.3
1,337,955	-				-0.3
1,338,127	+		PS417_06020	0.12	-0.3
1,338,128	-		PS417_06020	0.12	+0.9
1,338,131	-		PS417_06020	0.13	+1.2
1,338,331	+				+1.5
1,338,403	+		PS417_06020	0.34	+0.2
1,338,404	-		PS417_06020	0.34	+1.0
1,338,404	-		PS417_06020	0.34	+0.0
1,338,525	+		PS417_06020	0.43	+1.9
1,338,526	-		PS417_06020	0.43	+1.9
1,338,526	-		PS417_06020	0.43	-0.1
1,338,581	-		PS417_06020	0.48	+0.3
1,338,997	+		PS417_06020	0.80	-0.3
1,338,998	-		PS417_06020	0.80	-0.0
1,339,003	+		PS417_06020	0.81	-0.5
1,339,003	+		PS417_06020	0.81	-0.0
1,339,004	-		PS417_06020	0.81	+0.1
1,339,004	-		PS417_06020	0.81	-0.0
1,339,132	+				-0.0
1,339,133	-				-0.5
1,339,303	+				+1.0
1,339,304	-				-0.6
1,339,304	-				+0.7
1,339,304	-				-0.9
1,339,304	-				-0.1
1,339,304	-				+0.5
1,339,305	+				+0.2
1,339,305	+				-0.1
1,339,305	+				+0.1
1,339,305	+				-0.7
1,339,305	+				-1.0
1,339,305	+				-0.3
1,339,305	+				+0.2
1,339,305	+				+0.1
1,339,305	+				+1.8
1,339,306	-				-0.4
1,339,306	-				+0.5
1,339,306	-				-0.8
1,339,306	-				-0.2
1,339,306	-				-0.3
1,339,306	-				+1.4
1,339,306	-				-0.5
1,339,306	-				-0.1
1,339,306	-				-1.6
1,339,309	+				-0.1
1,339,309	+				-0.6
1,339,309	+				+0.1
1,339,309	+				-0.8
1,339,309	+				+0.6
1,339,309	+				+0.1
1,339,309	+				+0.5
1,339,310	-				-0.5
1,339,310	-				-0.1
1,339,310	-				+0.8
1,339,310	-				-0.3
1,339,310	-				-0.1
1,339,310	-				+0.3
1,339,310	-				-0.7
1,339,310	-				-0.4
1,339,310	-				-0.2
1,339,385	+				-1.9
1,339,386	-				-0.6
1,339,389	-				-0.1
1,339,433	+				+0.2
1,339,516	+		PS417_06025	0.12	-0.2
1,339,711	+		PS417_06025	0.34	-0.2
1,339,751	-		PS417_06025	0.38	-0.3
1,339,859	-		PS417_06025	0.50	+0.6
1,339,859	-		PS417_06025	0.50	-0.3
1,339,938	-		PS417_06025	0.59	-0.6
1,339,938	-		PS417_06025	0.59	-0.2