Strain Fitness in Pseudomonas simiae WCS417 around PS417_21530

Experiment: TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 500 uM; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 500 uM; timepoint 1
4,673,324	-				-0.1
4,673,324	-				-0.5
4,673,329	+				+0.4
4,673,366	+				-1.3
4,673,367	-				-0.6
4,673,456	+				-0.7
4,673,456	+				+0.1
4,674,179	-				-0.6
4,674,271	+				+0.4
4,674,276	-				+1.2
4,674,576	+		PS417_21530	0.25	-0.2
4,674,577	-		PS417_21530	0.25	+0.1
4,674,612	+		PS417_21530	0.27	-0.4
4,674,612	+		PS417_21530	0.27	-0.3
4,674,612	+		PS417_21530	0.27	-0.6
4,674,613	-		PS417_21530	0.27	-0.3
4,674,689	-		PS417_21530	0.32	+0.2
4,674,708	+		PS417_21530	0.33	-0.6
4,674,751	+		PS417_21530	0.36	+0.1
4,674,882	+		PS417_21530	0.44	-0.0
4,674,882	+		PS417_21530	0.44	-0.0
4,674,883	-		PS417_21530	0.44	-1.0
4,674,883	-		PS417_21530	0.44	-1.9
4,674,883	-		PS417_21530	0.44	-0.5
4,674,883	-		PS417_21530	0.44	-0.3
4,675,036	+		PS417_21530	0.53	-0.3
4,675,036	+		PS417_21530	0.53	-0.3
4,675,036	+		PS417_21530	0.53	-0.6
4,675,036	+		PS417_21530	0.53	+0.1
4,675,115	-		PS417_21530	0.58	-0.7
4,675,302	+		PS417_21530	0.70	+0.0
4,675,302	+		PS417_21530	0.70	-0.4
4,675,303	-		PS417_21530	0.70	-0.6
4,675,303	-		PS417_21530	0.70	-0.8
4,675,303	-		PS417_21530	0.70	-0.1
4,675,303	-				-0.2
4,675,366	+		PS417_21530	0.74	-1.5
4,675,367	-		PS417_21530	0.74	-0.7
4,675,452	+		PS417_21530	0.79	-0.8
4,675,762	+				-0.8
4,675,762	+				-0.2
4,675,762	+				-0.2
4,675,762	+				+0.1
4,675,762	+				-0.6
4,675,763	-				+0.4
4,675,763	-				+0.4
4,675,824	+				-0.6
4,675,877	+		PS417_21535	0.13	-0.4
4,675,901	-		PS417_21535	0.16	-0.5
4,675,901	-		PS417_21535	0.16	+0.0
4,676,205	+		PS417_21535	0.58	+0.2
4,676,205	+		PS417_21535	0.58	+0.7
4,676,205	+		PS417_21535	0.58	+1.1
4,676,206	-		PS417_21535	0.58	-0.1
4,676,439	+				+0.1
4,676,440	-				-0.1
4,676,480	+				-0.6
4,676,486	+				+0.0
4,676,487	-				-0.3
4,676,531	+				-0.8
4,676,531	+				-0.2
4,676,531	+				+0.1
4,676,646	-				-0.3
4,676,681	+				-0.5
4,676,696	+				-0.0
4,676,754	+				+0.1
4,676,755	-				-0.5
4,676,755	-				-1.4
4,676,786	+				-0.1
4,676,787	-				-1.5