Strain Fitness in Pseudomonas simiae WCS417 around PS417_26290

Experiment: TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1
5,680,962	-		PS417_26285	0.53	-0.1
5,681,156	+		PS417_26285	0.73	-1.4
5,681,156	+		PS417_26285	0.73	+0.2
5,681,157	-		PS417_26285	0.73	+0.7
5,681,157	-		PS417_26285	0.73	-0.5
5,681,234	+		PS417_26285	0.81	+0.1
5,681,235	-		PS417_26285	0.81	+0.5
5,681,235	-		PS417_26285	0.81	-0.4
5,681,446	+				+0.2
5,681,446	+				-0.6
5,681,446	+				-0.2
5,681,446	+				-0.6
5,681,480	-		PS417_26290	0.11	-0.7
5,681,621	-		PS417_26290	0.40	-0.8
5,681,621	-		PS417_26290	0.40	-0.2
5,681,621	-		PS417_26290	0.40	-1.0
5,681,662	-		PS417_26290	0.49	+0.3
5,681,915	+				-0.5
5,681,922	-				+0.2
5,681,965	-				-0.0
5,681,965	-				-0.0
5,681,996	+				+0.0
5,682,098	+				-0.1
5,682,098	+		PS417_26295	0.14	+0.4
5,682,098	+		PS417_26295	0.14	-0.8
5,682,100	+		PS417_26295	0.14	-0.4
5,682,101	-		PS417_26295	0.15	-0.1
5,682,101	-		PS417_26295	0.15	+0.8