Strain Fitness in Pseudomonas simiae WCS417 around PS417_26180

Experiment: TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1
5,655,184	-		PS417_26170	0.88	+0.1
5,655,188	+		PS417_26170	0.88	-0.5
5,655,188	+		PS417_26170	0.88	-0.0
5,655,189	-		PS417_26170	0.88	-0.6
5,655,189	-		PS417_26170	0.88	-0.2
5,655,189	-		PS417_26170	0.88	-0.2
5,655,293	+				-1.9
5,655,486	+		PS417_26175	0.30	+0.2
5,655,486	+		PS417_26175	0.30	-0.6
5,655,914	+				-0.3
5,655,914	+				-0.6
5,655,914	+				-0.3
5,655,914	+				+0.5
5,655,914	+				-0.1
5,655,915	-				-0.1
5,655,915	-				-0.3
5,655,915	-				+0.2
5,655,932	-				-0.1
5,656,342	+				+0.3
5,656,409	-		PS417_26180	0.12	-0.2
5,656,502	+		PS417_26180	0.15	+0.0
5,656,503	-		PS417_26180	0.15	-0.5
5,656,571	+		PS417_26180	0.17	+0.1
5,656,585	-		PS417_26180	0.18	-0.6
5,656,640	+		PS417_26180	0.19	-0.1
5,656,671	-		PS417_26180	0.20	+0.7
5,656,797	+		PS417_26180	0.25	-0.2
5,656,798	-		PS417_26180	0.25	-0.8
5,656,830	+				+1.5
5,657,002	-		PS417_26180	0.31	+0.1
5,657,002	-		PS417_26180	0.31	-0.1
5,657,148	+		PS417_26180	0.36	+0.6
5,657,149	-		PS417_26180	0.36	-0.1
5,657,544	+		PS417_26180	0.49	+1.0
5,657,544	+		PS417_26180	0.49	-0.4
5,658,126	+		PS417_26180	0.69	+0.2
5,658,127	-		PS417_26180	0.69	+0.2
5,658,583	-		PS417_26180	0.84	-0.0
5,658,639	+		PS417_26180	0.86	+3.3
5,658,640	-		PS417_26180	0.86	+0.2
5,658,690	+		PS417_26180	0.87	-0.1
5,658,690	+		PS417_26180	0.87	-1.7
5,658,795	+				-0.4
5,658,796	-				-0.3
5,659,025	-				+0.2
5,659,124	+		PS417_26185	0.18	+0.2
5,659,124	+		PS417_26185	0.18	-0.3
5,659,143	-		PS417_26185	0.24	+0.1
5,659,172	+		PS417_26185	0.34	-1.0
5,659,172	+		PS417_26185	0.34	+0.3
5,659,172	+		PS417_26185	0.34	+0.2
5,659,244	+		PS417_26185	0.58	-0.6
5,659,245	-		PS417_26185	0.58	-0.2
5,659,245	-		PS417_26185	0.58	+0.6
5,659,362	+				-0.7
5,659,362	+				+0.5
5,659,363	-				+0.3
5,659,371	+				+0.0
5,659,737	-		PS417_26190	0.28	+0.2
5,659,790	+		PS417_26190	0.32	+0.1
5,659,791	-		PS417_26190	0.32	+0.1