Strain Fitness in Pseudomonas simiae WCS417 around PS417_24780

Experiment: TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1
5,373,060	-				-0.4
5,373,060	-				+0.3
5,373,060	-				-0.3
5,373,060	-				+0.2
5,373,100	+				-0.0
5,373,100	+				-1.0
5,373,100	+				-0.0
5,373,100	+				-1.2
5,373,101	-				-0.8
5,373,101	-				-0.2
5,373,101	-				-0.3
5,373,101	-				-0.2
5,373,116	-				+0.4
5,373,175	+				+0.5
5,373,175	+				+0.1
5,373,176	-				-0.3
5,373,176	-				-0.4
5,373,190	+				-0.2
5,373,214	+				-1.6
5,373,214	+				-0.3
5,373,251	+				-0.0
5,373,252	-				+0.6
5,373,252	-				-0.1
5,373,255	+				-0.2
5,373,255	+				-0.4
5,373,255	+				-0.0
5,373,256	-				-0.1
5,373,256	-				+1.5
5,373,331	+		PS417_24775	0.19	-0.6
5,373,331	+		PS417_24775	0.19	-0.5
5,373,510	-		PS417_24775	0.58	-0.1
5,373,510	-		PS417_24775	0.58	-0.3
5,373,665	+				+1.1
5,373,665	+				-0.6
5,373,665	+				-0.5
5,373,665	+				-2.1
5,373,665	+				-0.3
5,373,666	-				-0.3
5,373,666	-				-0.2
5,373,666	-				-0.0
5,373,666	-				+0.6
5,373,689	+				-0.4
5,373,723	+				-0.5
5,373,740	+				-0.5
5,373,740	+				-0.3
5,373,741	-				-0.5
5,373,741	-				-1.1
5,373,741	-				-0.1
5,373,744	+				-0.2
5,373,745	-				-0.4
5,373,745	-				-0.0
5,373,751	-				+0.3
5,373,754	+				+0.1
5,373,755	-				+0.0
5,373,755	-				-0.4
5,373,755	-				+0.3
5,373,755	-				-0.5
5,374,385	+		PS417_24780	0.34	-0.6
5,374,385	+		PS417_24780	0.34	-0.3
5,374,385	+		PS417_24780	0.34	+0.2
5,374,385	+		PS417_24780	0.34	-1.0
5,374,385	+		PS417_24780	0.34	-0.5
5,374,386	-		PS417_24780	0.34	-0.6
5,374,386	-		PS417_24780	0.34	-0.2
5,374,386	-		PS417_24780	0.34	-0.6
5,374,386	-		PS417_24780	0.34	-0.7
5,374,523	+		PS417_24780	0.42	-0.4
5,374,523	+		PS417_24780	0.42	-0.5
5,374,523	+		PS417_24780	0.42	-0.3
5,374,524	-		PS417_24780	0.42	-0.8
5,374,524	-		PS417_24780	0.42	-1.1
5,374,524	-		PS417_24780	0.42	-0.6
5,374,593	-		PS417_24780	0.46	-0.5
5,374,593	-		PS417_24780	0.46	-0.5
5,374,593	-		PS417_24780	0.46	-0.3
5,374,811	+		PS417_24780	0.58	-0.0
5,374,811	+		PS417_24780	0.58	+0.3
5,374,811	+		PS417_24780	0.58	-0.4
5,374,812	-		PS417_24780	0.59	-0.8
5,375,030	-		PS417_24780	0.71	-0.7
5,375,030	-		PS417_24780	0.71	+0.0
5,375,033	+		PS417_24780	0.71	-0.3
5,375,033	+		PS417_24780	0.71	+1.2
5,375,033	+		PS417_24780	0.71	-0.8
5,375,034	-		PS417_24780	0.71	-0.1
5,375,034	-				+1.8
5,375,034	-		PS417_24780	0.71	+0.1
5,375,285	+		PS417_24780	0.86	-0.0
5,375,285	+				+1.6
5,375,451	+				-0.2
5,375,500	+				+0.5
5,375,523	-				-0.2
5,375,523	-				-0.5
5,375,523	-				+0.1
5,375,523	-				-0.6
5,375,537	-				-0.1
5,375,557	+				+0.4
5,375,558	-				+0.4
5,375,558	-				+0.1
5,375,574	+				-0.1
5,375,575	-				-2.3
5,375,926	+		PS417_24785	0.58	-0.6
5,375,927	-				+0.9
5,375,927	-		PS417_24785	0.58	-0.1
5,376,082	+		PS417_24785	0.82	-0.3
5,376,193	+				+0.6
5,376,193	+				+0.1
5,376,194	-				-0.3
5,376,194	-				-0.1
5,376,203	+				-0.1
5,376,204	-				-0.2
5,376,272	-				-0.7
5,376,272	-				-0.8
5,376,272	-				-0.4
5,376,272	-				-0.1
5,376,274	+				-0.3
5,376,274	+				-0.7
5,376,274	+				-0.4
5,376,521	+		PS417_24790	0.66	-0.8
5,376,521	+		PS417_24790	0.66	-0.1
5,376,521	+		PS417_24790	0.66	+0.4
5,376,521	+		PS417_24790	0.66	-0.2
5,376,521	+		PS417_24790	0.66	-0.0
5,376,522	-		PS417_24790	0.66	+0.0