Strain Fitness in Pseudomonas simiae WCS417 around PS417_06460

Experiment: TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 2
1,431,365	-		PS417_06450	0.77	-0.2
1,431,374	-		PS417_06450	0.77	-0.3
1,431,374	-		PS417_06450	0.77	-0.1
1,431,374	-		PS417_06450	0.77	+0.1
1,431,374	-		PS417_06450	0.77	-0.5
1,431,495	+		PS417_06450	0.88	-0.1
1,431,496	-		PS417_06450	0.88	-0.1
1,431,770	-		PS417_06455	0.17	+0.1
1,431,957	-		PS417_06455	0.44	-0.5
1,431,957	-		PS417_06455	0.44	-0.2
1,432,097	+		PS417_06455	0.65	+0.2
1,432,125	+		PS417_06455	0.69	-0.4
1,432,349	+				+0.1
1,432,349	+				-0.3
1,432,433	+				-0.0
1,432,434	-				+0.2
1,432,436	+				-0.3
1,432,436	+				+0.3
1,432,437	-				-0.4
1,432,553	+				+0.5
1,432,553	+				+0.4
1,432,587	-		PS417_06460	0.10	-0.3
1,432,616	+		PS417_06460	0.12	+0.0
1,432,616	+		PS417_06460	0.12	-0.5
1,432,617	-		PS417_06460	0.12	+0.3
1,432,632	-		PS417_06460	0.12	-0.8
1,432,650	-		PS417_06460	0.13	+0.1
1,432,691	+		PS417_06460	0.15	+0.1
1,432,691	+				+1.5
1,432,793	+		PS417_06460	0.19	+0.8
1,432,793	+		PS417_06460	0.19	+0.5
1,432,794	-		PS417_06460	0.19	-0.3
1,433,087	+		PS417_06460	0.31	+0.1
1,433,096	+		PS417_06460	0.32	-0.2
1,433,096	+		PS417_06460	0.32	-0.0
1,433,097	-				-0.3
1,433,097	-		PS417_06460	0.32	-0.1
1,433,324	+		PS417_06460	0.41	-0.1
1,433,324	+		PS417_06460	0.41	+0.4
1,433,324	+		PS417_06460	0.41	-0.0
1,433,324	+		PS417_06460	0.41	+1.4
1,433,324	+		PS417_06460	0.41	-0.3
1,433,423	+		PS417_06460	0.46	+0.2
1,433,424	-		PS417_06460	0.46	+0.1
1,433,627	-		PS417_06460	0.54	+0.6
1,433,627	-		PS417_06460	0.54	+0.9
1,434,050	+		PS417_06460	0.72	-0.9
1,434,051	-		PS417_06460	0.72	-0.1
1,434,069	+		PS417_06460	0.73	-0.0
1,434,069	+		PS417_06460	0.73	-0.2
1,434,070	-		PS417_06460	0.73	+0.7
1,434,070	-				+1.0
1,434,073	+		PS417_06460	0.73	+0.3
1,434,074	-		PS417_06460	0.73	-0.2
1,434,400	-		PS417_06460	0.87	+0.2
1,434,535	+				-0.3
1,434,535	+				+0.0
1,434,743	-				+0.5
1,434,772	+				-0.1
1,434,772	+				+0.0
1,434,772	+				-0.2
1,434,773	-				-0.7
1,434,773	-				+1.0
1,434,824	+				-0.7
1,434,835	-				-0.0
1,434,848	-				-0.2
1,435,219	+		PS417_06465	0.42	-0.4
1,435,220	-		PS417_06465	0.42	-0.0
1,435,370	+		PS417_06465	0.63	-0.1
1,435,370	+		PS417_06465	0.63	+0.0