Strain Fitness in Pseudomonas simiae WCS417 around PS417_17525

Experiment: TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 2
3,827,015	-				-0.4
3,827,015	-				+0.3
3,827,063	+				+0.1
3,827,086	+				-0.0
3,827,087	-				-0.2
3,827,091	+				-0.1
3,827,091	+				+0.5
3,827,091	+				-0.3
3,827,092	-				-0.2
3,827,092	-				-0.1
3,827,092	-				-0.3
3,827,092	-				-0.2
3,827,092	-				-0.1
3,827,092	-				-0.3
3,827,950	+				+1.0
3,828,036	-				-0.1
3,828,116	-		PS417_17525	0.11	+0.5
3,828,116	-		PS417_17525	0.11	+1.3
3,828,194	+		PS417_17525	0.17	-0.1
3,828,560	+		PS417_17525	0.47	-0.5
3,828,560	+		PS417_17525	0.47	-0.7
3,828,569	-				+0.5
3,828,569	-		PS417_17525	0.48	+0.2
3,828,572	+		PS417_17525	0.48	+0.2
3,828,689	+		PS417_17525	0.57	-0.5
3,828,689	+		PS417_17525	0.57	-0.3
3,828,689	+		PS417_17525	0.57	+0.5
3,828,690	-		PS417_17525	0.57	+0.2
3,828,690	-		PS417_17525	0.57	+0.3
3,828,690	-		PS417_17525	0.57	+0.2
3,828,786	+		PS417_17525	0.65	-0.1
3,828,787	-		PS417_17525	0.65	+0.2
3,828,809	+		PS417_17525	0.67	+0.3
3,828,809	+		PS417_17525	0.67	+1.2
3,828,810	-		PS417_17525	0.67	-0.2
3,828,810	-		PS417_17525	0.67	-0.2
3,828,889	+		PS417_17525	0.73	+0.6
3,828,890	-		PS417_17525	0.73	+0.1
3,828,890	-		PS417_17525	0.73	+0.4
3,828,890	-		PS417_17525	0.73	+0.2
3,828,956	-		PS417_17525	0.79	-0.3
3,829,000	+		PS417_17525	0.82	+0.1
3,829,000	+		PS417_17525	0.82	+0.0
3,829,001	-		PS417_17525	0.82	+0.0
3,829,001	-				-1.5
3,829,038	-		PS417_17525	0.85	+0.1
3,829,177	+				-0.4
3,829,177	+				-0.1
3,829,240	+				-0.7
3,829,241	-				-0.0
3,829,241	-				-0.3
3,829,241	-				+0.3
3,829,287	+				-0.1
3,829,303	+				-0.1
3,829,366	+		PS417_17530	0.28	+0.2
3,829,366	+		PS417_17530	0.28	-0.1
3,829,366	+		PS417_17530	0.28	+0.3
3,829,366	+		PS417_17530	0.28	-0.0
3,829,367	-		PS417_17530	0.28	+0.3
3,829,367	-		PS417_17530	0.28	-0.0
3,829,371	-		PS417_17530	0.29	+0.3
3,829,599	-				-0.6
3,829,747	+				+1.2
3,829,747	+				-0.3
3,829,747	+				-0.9
3,829,753	+				-0.0
3,829,754	-				-0.4
3,829,942	+		PS417_17535	0.28	-0.3
3,830,136	+		PS417_17535	0.50	+0.0
3,830,155	+		PS417_17535	0.52	+0.4