Strain Fitness in Pseudomonas simiae WCS417 around PS417_19885

Experiment: TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 2
4,317,778	+				-0.4
4,317,793	-				+0.6
4,317,793	-				+0.0
4,318,004	+		PS417_19880	0.31	-0.1
4,318,028	+		PS417_19880	0.34	-0.2
4,318,029	-		PS417_19880	0.34	-0.0
4,318,116	+		PS417_19880	0.47	+0.5
4,318,199	-		PS417_19880	0.59	+0.1
4,318,339	-		PS417_19880	0.79	-0.1
4,318,375	+		PS417_19880	0.84	+0.2
4,318,376	-		PS417_19880	0.84	-0.0
4,318,376	-		PS417_19880	0.84	+0.2
4,318,395	+		PS417_19880	0.87	+0.0
4,318,395	+		PS417_19880	0.87	-0.7
4,318,396	-		PS417_19880	0.87	-0.1
4,318,477	-				-0.3
4,318,531	+				-0.0
4,318,532	-				-0.0
4,318,541	+				-0.2
4,318,985	+		PS417_19885	0.57	-1.3
4,318,986	-		PS417_19885	0.57	-0.0
4,319,372	+				+1.0
4,319,373	-				-0.5
4,319,842	+		PS417_19890	0.60	-0.2
4,319,842	+		PS417_19890	0.60	-0.2
4,320,121	+				+0.8
4,320,121	+				+1.7
4,320,121	+				+1.6
4,320,122	-				-0.1
4,320,122	-				+0.3
4,320,122	-				-0.2
4,320,127	+				-0.2
4,320,128	-				-0.2
4,320,128	-				+0.3
4,320,128	-				-0.5
4,320,128	-				-0.0
4,320,179	+				+0.0
4,320,304	+				+0.4
4,320,305	-				+0.1