Strain Fitness in Pseudomonas simiae WCS417 around PS417_18310
Experiment: TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 2 |
---|---|---|---|---|---|
remove | |||||
3,990,189 | + | PS417_18300 | 0.44 | +0.2 | |
3,990,189 | + | PS417_18300 | 0.44 | -0.2 | |
3,990,190 | - | PS417_18300 | 0.44 | -0.3 | |
3,990,221 | - | PS417_18300 | 0.49 | +0.3 | |
3,990,426 | + | PS417_18300 | 0.79 | +0.2 | |
3,990,460 | + | PS417_18300 | 0.83 | -0.2 | |
3,990,534 | + | -0.0 | |||
3,991,123 | + | PS417_18310 | 0.39 | -0.3 | |
3,991,172 | - | PS417_18310 | 0.53 | +1.7 | |
3,991,240 | - | PS417_18310 | 0.72 | +0.1 |
Or see this region's nucleotide sequence