Strain Fitness in Pseudomonas simiae WCS417 around PS417_18090

Experiment: TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 2
3,939,378	-		PS417_18085	0.74	-0.3
3,939,447	-		PS417_18085	0.78	+0.1
3,939,447	-		PS417_18085	0.78	+0.1
3,939,529	+		PS417_18085	0.83	+1.0
3,939,529	+		PS417_18085	0.83	+0.2
3,939,536	+		PS417_18085	0.83	-1.2
3,939,605	-		PS417_18085	0.87	+0.3
3,939,823	-				-0.2
3,939,837	+				+0.3
3,939,837	+				-0.1
3,939,869	+				-0.3
3,939,886	-				-0.4
3,939,911	-				+0.0
3,939,911	-				+0.2
3,939,974	+				-0.2
3,939,975	-				+0.9
3,939,975	-				+0.0
3,940,003	+				+0.3
3,940,005	+				+0.4
3,940,005	+				+1.1
3,940,011	-				-0.4
3,940,096	+				-0.4
3,940,318	-		PS417_18090	0.23	+0.9
3,940,425	+		PS417_18090	0.36	+0.6
3,940,426	-		PS417_18090	0.36	+0.3
3,940,731	+		PS417_18090	0.75	-0.6
3,940,732	-		PS417_18090	0.75	+0.4
3,940,732	-		PS417_18090	0.75	+0.2
3,940,885	+				+0.1
3,941,095	+		PS417_18095	0.17	-1.5
3,941,096	-		PS417_18095	0.17	+0.1
3,941,582	+		PS417_18095	0.67	+0.3
3,941,604	+		PS417_18095	0.69	-0.2
3,941,605	-		PS417_18095	0.69	-0.2
3,941,880	+				-0.5
3,941,881	-				-0.1