Strain Fitness in Pseudomonas simiae WCS417 around PS417_14145

Experiment: TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 2
3,102,188	+				-0.2
3,102,213	+				+0.2
3,102,214	-				+0.4
3,102,645	+		PS417_14140	0.65	-0.5
3,102,645	+		PS417_14140	0.65	-0.8
3,102,645	+		PS417_14140	0.65	+0.5
3,102,646	-		PS417_14140	0.65	+0.1
3,102,879	+				-0.8
3,102,880	-				-0.3
3,102,923	-				+0.3
3,103,029	-				+0.3
3,103,085	-		PS417_14145	0.13	-0.4
3,103,085	-		PS417_14145	0.13	-0.4
3,103,101	+		PS417_14145	0.17	-0.7
3,103,101	+		PS417_14145	0.17	-0.2
3,103,102	-		PS417_14145	0.18	-0.7
3,103,102	-		PS417_14145	0.18	-0.3
3,103,102	-		PS417_14145	0.18	-0.5
3,103,104	+		PS417_14145	0.18	-0.5
3,103,104	+				-0.5
3,103,104	+		PS417_14145	0.18	-0.2
3,103,105	-		PS417_14145	0.18	+0.0
3,103,379	+				-0.1
3,103,379	+				+0.1
3,103,379	+				-0.4
3,103,379	+				-0.7
3,103,380	-				-0.0
3,103,424	+				-0.2
3,103,425	-				-0.2
3,103,425	-				-0.1
3,103,493	+				+0.1
3,103,493	+				-0.8
3,103,494	-				+0.2
3,103,494	-				-0.1
3,103,515	-				+0.2
3,103,517	+				-0.1
3,103,673	+		PS417_14150	0.35	+0.4
3,103,869	-				+0.2
3,103,869	-				-0.2
3,103,869	-				-0.7
3,103,869	-				+0.1
3,103,869	-				-0.1
3,104,017	-		PS417_14155	0.21	+0.6
3,104,017	-				-0.5
3,104,017	-		PS417_14155	0.21	-0.6
3,104,149	+		PS417_14155	0.40	-0.2
3,104,149	+		PS417_14155	0.40	+0.7
3,104,149	+		PS417_14155	0.40	+0.2
3,104,150	-		PS417_14155	0.40	+0.0
3,104,176	+		PS417_14155	0.44	+0.1
3,104,203	+		PS417_14155	0.48	-0.1
3,104,203	+		PS417_14155	0.48	+0.1