Strain Fitness in Pseudomonas simiae WCS417 around PS417_27505

Experiment: TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1
5,933,815	-				+0.1
5,933,815	-				-0.1
5,933,831	+				-0.4
5,933,831	+				-0.2
5,933,832	-				-0.1
5,933,832	-				-0.1
5,933,861	-				-0.7
5,933,889	+				+0.2
5,933,889	+				-0.1
5,933,889	+				-0.0
5,933,889	+				-0.1
5,933,892	+				+0.0
5,933,892	+				-0.3
5,933,892	+				+0.1
5,933,892	+				-0.5
5,933,893	-				+0.1
5,933,893	-				-0.6
5,933,976	-				-0.9
5,933,999	-				+0.5
5,933,999	-				-0.6
5,934,016	+				-1.2
5,934,233	-		PS417_27500	0.27	+1.2
5,934,489	+		PS417_27500	0.65	+0.0
5,934,489	+		PS417_27500	0.65	-0.3
5,934,489	+		PS417_27500	0.65	+0.3
5,934,490	-		PS417_27500	0.65	-0.2
5,934,642	+		PS417_27500	0.88	+2.0
5,934,643	-		PS417_27500	0.88	+0.2
5,934,707	-				-0.8
5,934,707	-				-0.5
5,934,805	+				-0.3
5,934,805	+				-0.3
5,934,933	-		PS417_27505	0.34	-1.3
5,934,933	-		PS417_27505	0.34	-0.4
5,934,933	-		PS417_27505	0.34	+0.1
5,934,964	-		PS417_27505	0.40	-2.1
5,934,964	-		PS417_27505	0.40	+0.0
5,935,059	+		PS417_27505	0.61	-1.8
5,935,060	-		PS417_27505	0.61	-0.0
5,935,060	-		PS417_27505	0.61	+0.2
5,935,254	+				+0.4
5,935,254	+				+0.1
5,935,255	-				+0.6
5,935,360	+				-0.4
5,935,361	-				+0.0
5,935,361	-				-1.0
5,935,407	+				+0.5
5,935,418	-				+1.0
5,935,428	+				-0.0
5,935,649	+		PS417_27510	0.39	-0.3
5,935,649	+		PS417_27510	0.39	-1.2
5,935,650	-		PS417_27510	0.39	-0.5
5,935,650	-		PS417_27510	0.39	+0.1
5,935,763	+		PS417_27510	0.61	-0.0
5,935,764	-		PS417_27510	0.61	-0.9
5,935,893	-		PS417_27510	0.85	+0.2
5,935,991	+				-0.3
5,935,992	-				-0.4
5,936,030	+				-0.1
5,936,030	+				-0.1
5,936,030	+				-0.9
5,936,031	-				+1.2
5,936,031	-				-0.8
5,936,071	-				+1.2
5,936,130	+				+0.3
5,936,130	+				-0.5
5,936,131	-				+0.3
5,936,131	-				+0.5
5,936,193	+				+0.1
5,936,193	+				-0.2
5,936,194	-				+0.2
5,936,201	+				-0.2
5,936,202	-				+1.2
5,936,202	-				+0.3