Experiment: TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26990 and PS417_26995 are separated by 143 nucleotides PS417_26995 and PS417_27000 are separated by 112 nucleotides PS417_27000 and PS417_27005 are separated by 0 nucleotides PS417_27005 and PS417_27010 are separated by 41 nucleotides
PS417_26990: PS417_26990 - RNA pyrophosphohydrolase, at 5,830,126 to 5,830,605
_26990
PS417_26995: PS417_26995 - phosphoserine phosphatase, at 5,830,749 to 5,831,405
_26995
PS417_27000: PS417_27000 - membrane protein, at 5,831,518 to 5,831,985
_27000
PS417_27005: PS417_27005 - membrane protein, at 5,831,986 to 5,832,399
_27005
PS417_27010: PS417_27010 - threonine dehydratase, at 5,832,441 to 5,833,955
_27010
Position (kb) 5831
5832 Strain fitness (log2 ratio) -2
-1
0
1 at 5830.676 kb on + strand at 5830.676 kb on + strand at 5830.676 kb on + strand at 5830.677 kb on - strand at 5830.681 kb on + strand at 5830.682 kb on - strand at 5830.682 kb on - strand at 5830.706 kb on + strand at 5830.706 kb on + strand at 5830.819 kb on - strand, within PS417_26995 at 5830.986 kb on + strand, within PS417_26995 at 5830.986 kb on + strand, within PS417_26995 at 5830.987 kb on - strand, within PS417_26995 at 5830.987 kb on - strand, within PS417_26995 at 5830.988 kb on + strand, within PS417_26995 at 5830.988 kb on + strand, within PS417_26995 at 5830.988 kb on + strand, within PS417_26995 at 5830.988 kb on + strand, within PS417_26995 at 5830.989 kb on - strand, within PS417_26995 at 5830.989 kb on - strand, within PS417_26995 at 5831.271 kb on + strand, within PS417_26995 at 5831.271 kb on + strand, within PS417_26995 at 5831.271 kb on + strand, within PS417_26995 at 5831.272 kb on - strand, within PS417_26995 at 5831.272 kb on - strand, within PS417_26995 at 5831.277 kb on + strand, within PS417_26995 at 5831.277 kb on + strand, within PS417_26995 at 5831.519 kb on + strand at 5831.519 kb on + strand at 5831.523 kb on + strand at 5831.523 kb on + strand at 5831.523 kb on + strand at 5831.523 kb on + strand at 5831.524 kb on - strand at 5831.524 kb on - strand at 5831.524 kb on - strand at 5831.524 kb on - strand at 5831.524 kb on - strand at 5831.603 kb on + strand, within PS417_27000 at 5831.603 kb on + strand, within PS417_27000 at 5831.718 kb on - strand, within PS417_27000 at 5831.906 kb on + strand, within PS417_27000 at 5831.907 kb on - strand, within PS417_27000 at 5831.952 kb on + strand at 5831.952 kb on + strand at 5831.952 kb on + strand at 5831.953 kb on - strand at 5831.953 kb on - strand at 5831.975 kb on + strand at 5831.976 kb on - strand at 5831.988 kb on - strand at 5832.072 kb on + strand, within PS417_27005 at 5832.435 kb on - strand at 5832.461 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1 remove 5,830,676 + +0.0 5,830,676 + -1.2 5,830,676 + +0.6 5,830,677 - -0.8 5,830,681 + +0.3 5,830,682 - -0.2 5,830,682 - -0.4 5,830,706 + -0.6 5,830,706 + -0.6 5,830,819 - PS417_26995 0.11 -0.6 5,830,986 + PS417_26995 0.36 +0.5 5,830,986 + PS417_26995 0.36 +0.2 5,830,987 - PS417_26995 0.36 -0.1 5,830,987 - PS417_26995 0.36 +0.2 5,830,988 + PS417_26995 0.36 -0.1 5,830,988 + PS417_26995 0.36 -0.2 5,830,988 + PS417_26995 0.36 -0.0 5,830,988 + PS417_26995 0.36 -0.4 5,830,989 - PS417_26995 0.37 -0.0 5,830,989 - PS417_26995 0.37 -0.6 5,831,271 + PS417_26995 0.79 +0.0 5,831,271 + PS417_26995 0.79 -0.1 5,831,271 + PS417_26995 0.79 -0.3 5,831,272 - PS417_26995 0.80 -0.2 5,831,272 - PS417_26995 0.80 -0.4 5,831,277 + PS417_26995 0.80 -0.8 5,831,277 + PS417_26995 0.80 -0.6 5,831,519 + -1.9 5,831,519 + -2.3 5,831,523 + -0.3 5,831,523 + +0.8 5,831,523 + +0.1 5,831,523 + +0.0 5,831,524 - +0.3 5,831,524 - +0.1 5,831,524 - -0.2 5,831,524 - -0.2 5,831,524 - +0.6 5,831,603 + PS417_27000 0.18 -0.6 5,831,603 + PS417_27000 0.18 -0.0 5,831,718 - PS417_27000 0.43 -1.9 5,831,906 + PS417_27000 0.83 -0.6 5,831,907 - PS417_27000 0.83 -0.4 5,831,952 + -0.3 5,831,952 + -0.3 5,831,952 + -0.0 5,831,953 - -1.0 5,831,953 - +0.0 5,831,975 + +1.4 5,831,976 - -0.0 5,831,988 - -1.2 5,832,072 + PS417_27005 0.21 -0.1 5,832,435 - -0.3 5,832,461 - -0.1
Or see this region's nucleotide sequence