Strain Fitness in Pseudomonas simiae WCS417 around PS417_19955

Experiment: TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1
4,332,445	-		PS417_19950	0.67	-0.4
4,332,532	+		PS417_19950	0.71	+0.3
4,332,684	+		PS417_19950	0.78	+0.0
4,332,685	-		PS417_19950	0.78	-0.6
4,332,716	+		PS417_19950	0.80	-0.5
4,332,717	-		PS417_19950	0.80	-0.7
4,332,810	+		PS417_19950	0.84	+0.1
4,333,280	+				-0.1
4,333,281	-				-0.4
4,333,334	+				-0.1
4,333,334	+				-0.3
4,333,373	+				-0.4
4,333,402	-				+0.1
4,333,486	+		PS417_19955	0.13	+0.1
4,333,504	+		PS417_19955	0.16	-1.0
4,333,940	-				-0.3
4,334,132	-		PS417_19960	0.29	+0.3
4,334,176	-		PS417_19960	0.41	+0.4
4,334,223	+		PS417_19960	0.53	-0.0
4,334,263	-		PS417_19960	0.64	-0.1
4,334,363	+		PS417_19960	0.90	-1.1
4,334,363	+		PS417_19960	0.90	-0.5
4,334,363	+		PS417_19960	0.90	+1.0
4,334,364	-				+0.4
4,334,364	-				-1.9
4,334,367	+				-0.4
4,334,367	+				+1.0
4,334,367	+				-0.1
4,334,368	-				+0.2
4,334,368	-				-0.4
4,334,368	-				-0.5
4,334,368	-				-0.4
4,334,368	-				-0.2
4,334,501	+				-1.1
4,334,501	+				-0.1
4,334,502	-				-0.6
4,334,502	-				-0.4
4,334,559	+				-2.5
4,334,559	+				-0.7
4,334,559	+				-0.8
4,334,560	-				+1.4
4,334,560	-				-0.8
4,334,571	-				-0.8
4,334,641	-				-0.2
4,334,641	-				-0.1
4,334,641	-				-0.4
4,334,661	+				-0.3
4,334,661	+				+0.2
4,334,661	+				+0.8
4,334,661	+				+1.3
4,334,662	-				+1.0
4,334,831	+				-0.6
4,334,832	-				-0.3
4,334,907	+		PS417_19965	0.11	+0.4
4,334,907	+		PS417_19965	0.11	-0.5
4,334,908	-		PS417_19965	0.11	-0.5
4,334,908	-		PS417_19965	0.11	-0.4
4,334,908	-		PS417_19965	0.11	+1.0