Strain Fitness in Pseudomonas simiae WCS417 around PS417_16005

Experiment: TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1
3,506,965	+				+0.1
3,506,965	+				-0.7
3,507,068	-				-0.8
3,507,085	+				-0.4
3,507,085	+				-0.1
3,507,086	-				+0.1
3,507,086	-				+0.2
3,507,096	-				+0.1
3,507,149	+				+0.8
3,507,238	-				-0.7
3,507,260	+		PS417_16000	0.12	+0.5
3,507,261	-		PS417_16000	0.12	-0.2
3,507,264	-		PS417_16000	0.13	-0.3
3,507,840	+				+0.2
3,507,841	-				-1.5
3,507,842	+				+0.5
3,507,867	+				-0.6
3,507,867	+				+0.2
3,507,868	-				-0.0
3,508,022	+				-0.2
3,508,380	+		PS417_16005	0.36	-1.5
3,508,676	-		PS417_16005	0.59	-1.0
3,508,827	-		PS417_16005	0.70	-1.4
3,509,002	-		PS417_16005	0.84	+0.3
3,509,347	+				-1.9
3,509,347	+				+0.4
3,509,799	-		PS417_16010	0.36	-1.0
3,509,808	+		PS417_16010	0.37	+1.1
3,509,868	+		PS417_16010	0.42	+0.4
3,509,868	+		PS417_16010	0.42	-0.3
3,509,869	-		PS417_16010	0.42	-0.1
3,509,869	-				+0.6
3,509,871	+		PS417_16010	0.42	+0.1
3,509,872	-		PS417_16010	0.42	-0.4
3,509,931	+		PS417_16010	0.48	+0.7
3,509,988	+		PS417_16010	0.53	-0.3
3,509,989	-		PS417_16010	0.53	+0.0