Strain Fitness in Pseudomonas simiae WCS417 around PS417_13425

Experiment: TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1
2,952,666	+		PS417_13420	0.38	-0.1
2,952,678	+		PS417_13420	0.38	+0.4
2,952,678	+		PS417_13420	0.38	-0.4
2,952,678	+				+0.4
2,952,678	+		PS417_13420	0.38	-0.6
2,952,679	-		PS417_13420	0.38	+0.3
2,952,679	-		PS417_13420	0.38	-0.0
2,952,679	-		PS417_13420	0.38	+0.4
2,952,679	-		PS417_13420	0.38	+0.1
2,952,763	-		PS417_13420	0.44	-0.1
2,952,858	+		PS417_13420	0.51	-0.3
2,953,006	-		PS417_13420	0.62	+0.1
2,953,423	-				-0.0
2,953,557	-				+0.3
2,953,819	-		PS417_13425	0.73	+0.2
2,953,819	-		PS417_13425	0.73	-1.9
2,953,895	+				-0.2
2,953,895	+				+0.2
2,953,896	-				+0.0
2,953,896	-				-0.9
2,953,896	-				-0.6
2,953,896	-				-0.2
2,953,950	+				-0.6
2,954,060	+				-0.3
2,954,061	-				+0.0
2,954,061	-				-0.5
2,954,117	+		PS417_13430	0.13	-2.3
2,954,117	+		PS417_13430	0.13	-0.1
2,954,118	-		PS417_13430	0.13	-0.5
2,954,126	+		PS417_13430	0.14	+0.4
2,954,127	-		PS417_13430	0.14	-0.7
2,954,168	-		PS417_13430	0.18	-0.0
2,954,344	-		PS417_13430	0.34	-0.2
2,954,519	+		PS417_13430	0.51	+0.0
2,954,520	-		PS417_13430	0.51	-0.0
2,954,520	-		PS417_13430	0.51	-1.1
2,954,559	-		PS417_13430	0.54	-0.0
2,954,597	+		PS417_13430	0.58	-0.4
2,954,598	-		PS417_13430	0.58	-0.4
2,954,598	-		PS417_13430	0.58	+0.7
2,954,606	+		PS417_13430	0.59	-0.2
2,954,624	+		PS417_13430	0.60	+0.3
2,954,624	+		PS417_13430	0.60	-0.5
2,954,735	+		PS417_13430	0.71	+0.4
2,954,817	-		PS417_13430	0.78	-0.7
2,954,832	-				+1.5
2,954,870	+		PS417_13430	0.83	+0.6
2,954,870	+		PS417_13430	0.83	-0.2
2,954,871	-		PS417_13430	0.83	+0.2
2,954,871	-		PS417_13430	0.83	-2.1
2,954,871	-		PS417_13430	0.83	-0.5
2,954,880	-		PS417_13430	0.84	+0.6