Strain Fitness in Pseudomonas simiae WCS417 around PS417_24350

Experiment: TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1
5,283,114	+				-0.1
5,283,117	+				-0.0
5,283,267	+		PS417_24345	0.19	+0.4
5,283,310	-		PS417_24345	0.24	-0.1
5,283,345	+		PS417_24345	0.27	-0.1
5,283,345	+		PS417_24345	0.27	-0.0
5,283,346	-		PS417_24345	0.27	+0.1
5,284,020	+				+1.6
5,284,020	+				+0.5
5,284,020	+				+0.5
5,284,021	-				-0.1
5,284,021	-				-0.7
5,284,021	-				-0.4
5,284,184	+				-0.4
5,284,222	-				+0.5
5,284,237	+		PS417_24350	0.11	-1.4
5,284,237	+		PS417_24350	0.11	-0.2
5,284,314	-		PS417_24350	0.16	-0.5
5,284,314	-		PS417_24350	0.16	-1.0
5,284,351	+		PS417_24350	0.19	-0.6
5,284,441	+		PS417_24350	0.25	-0.6
5,285,222	-				-1.0
5,285,222	-		PS417_24350	0.79	-0.2
5,285,291	-		PS417_24350	0.84	+0.0
5,285,419	+				-0.1
5,285,420	-				-0.1
5,285,499	+				-0.4
5,285,519	+				+0.1
5,285,519	+				-0.2
5,285,541	+				-0.0
5,285,700	-				-0.7
5,285,780	+				-0.7
5,285,780	+				+0.6
5,285,781	-				-1.0
5,285,801	-				-0.0
5,285,959	+				-0.7
5,285,960	-				+0.4
5,286,358	+		PS417_24355	0.42	-0.1
5,286,359	-		PS417_24355	0.42	+0.5
5,286,379	+		PS417_24355	0.44	-0.7
5,286,380	-		PS417_24355	0.44	+0.4