Strain Fitness in Pseudomonas simiae WCS417 around PS417_24235

Experiment: TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1
5,257,223	+		PS417_24230	0.88	-3.6
5,257,224	-		PS417_24230	0.88	+0.5
5,257,224	-		PS417_24230	0.88	-0.1
5,257,224	-		PS417_24230	0.88	-0.6
5,257,224	-		PS417_24230	0.88	+0.0
5,257,224	-		PS417_24230	0.88	-0.3
5,257,517	+				+0.1
5,257,518	-				+0.7
5,257,518	-				-0.0
5,257,673	+				-0.4
5,257,674	-				-0.5
5,257,699	+				-0.5
5,257,699	+				-2.1
5,257,700	-				-0.4
5,257,700	-				-0.2
5,257,703	-				+0.8
5,257,703	-				+0.2
5,257,774	-				+0.8
5,257,926	+		PS417_24235	0.31	-0.0
5,257,927	-		PS417_24235	0.31	-0.2
5,257,997	-		PS417_24235	0.46	-0.6
5,258,087	-		PS417_24235	0.64	-0.5
5,258,087	-		PS417_24235	0.64	-0.7
5,258,260	+				-1.9
5,258,261	-				-0.3
5,258,331	+				-0.1
5,258,342	+				+0.0
5,258,343	-				+0.0
5,258,354	-				-0.5
5,258,510	+				-0.5
5,258,510	+				-0.2
5,258,510	+				+0.4
5,258,510	+				-0.1
5,258,511	-				-0.3
5,258,511	-				-0.4
5,258,511	-				+0.4
5,258,511	-				+0.1
5,258,880	-		PS417_24240	0.28	+0.0
5,259,122	+		PS417_24240	0.41	-0.4
5,259,237	+		PS417_24240	0.48	-0.5