Strain Fitness in Pseudomonas simiae WCS417 around PS417_21575

Experiment: TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1
4,683,862	+				+0.8
4,683,906	-		PS417_21570	0.11	-0.0
4,683,949	+		PS417_21570	0.22	-0.0
4,684,015	+		PS417_21570	0.38	+0.3
4,684,156	+		PS417_21570	0.72	+0.2
4,684,282	-				+0.3
4,684,516	+				+0.2
4,684,516	+				-0.0
4,684,516	+				-0.5
4,684,516	+				-0.2
4,684,516	+				-1.0
4,684,517	-				-0.5
4,684,517	-				+0.2
4,684,517	-				-0.7
4,684,517	-				-0.1
4,684,521	-				-0.4
4,684,564	+				+0.4
4,684,565	-				+0.0
4,684,574	+				+0.2
4,684,575	-				-1.2
4,684,578	-				+0.8
4,684,578	-				-0.6
4,684,589	+				+0.4
4,684,736	+		PS417_21575	0.19	-0.6
4,684,736	+		PS417_21575	0.19	-0.7
4,684,787	+		PS417_21575	0.25	-0.0
4,685,013	+				-0.9
4,685,013	+		PS417_21575	0.53	-0.4
4,685,014	-		PS417_21575	0.53	-0.7
4,685,014	-		PS417_21575	0.53	-0.4
4,685,014	-		PS417_21575	0.53	-1.3
4,685,159	+		PS417_21575	0.70	-0.2
4,685,160	-		PS417_21575	0.71	-1.3
4,685,341	+				-1.3
4,685,417	+				+1.0
4,685,418	-				+0.2
4,685,418	-				+0.2
4,685,579	+		PS417_21580	0.14	+0.6
4,685,579	+		PS417_21580	0.14	+0.6
4,685,579	+		PS417_21580	0.14	-0.4
4,685,579	+		PS417_21580	0.14	-0.5
4,685,580	-		PS417_21580	0.14	-0.1
4,685,580	-		PS417_21580	0.14	+0.2
4,685,580	-		PS417_21580	0.14	-0.1
4,685,622	+		PS417_21580	0.19	-0.5
4,685,622	+		PS417_21580	0.19	+0.7
4,685,641	+		PS417_21580	0.21	+1.1
4,685,641	+		PS417_21580	0.21	+0.6
4,685,642	-		PS417_21580	0.21	+0.5
4,685,732	-		PS417_21580	0.30	+1.3
4,685,767	-		PS417_21580	0.34	+0.4
4,685,767	-		PS417_21580	0.34	-0.1
4,685,767	-		PS417_21580	0.34	+0.4
4,685,986	+		PS417_21580	0.58	-0.1
4,685,986	+		PS417_21580	0.58	-0.9
4,686,038	+		PS417_21580	0.63	+0.5
4,686,039	-		PS417_21580	0.63	-0.4
4,686,039	-		PS417_21580	0.63	-0.3
4,686,092	-		PS417_21580	0.69	+0.2
4,686,283	+		PS417_21580	0.89	+0.4
4,686,284	-		PS417_21580	0.90	+0.4
4,686,357	+				-0.6
4,686,370	-				-0.8