Strain Fitness in Pseudomonas simiae WCS417 around PS417_17430

Experiment: TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1
3,806,358	-				-1.3
3,806,603	-		PS417_17420	0.77	-0.1
3,806,668	+		PS417_17420	0.83	+0.0
3,806,668	-		PS417_17420	0.83	-0.2
3,806,779	+				+0.4
3,806,780	-				-0.0
3,806,841	+				+0.2
3,806,841	+				-0.2
3,806,841	+				+0.6
3,806,842	-				-0.5
3,806,881	-				+0.4
3,806,891	+		PS417_17425	0.12	-0.1
3,806,891	+		PS417_17425	0.12	-0.2
3,806,907	+		PS417_17425	0.18	+0.1
3,807,008	-		PS417_17425	0.52	+0.2
3,807,008	-		PS417_17425	0.52	-0.3
3,807,008	-		PS417_17425	0.52	-1.0
3,807,062	+		PS417_17425	0.70	-0.6
3,807,108	-		PS417_17425	0.86	-0.2
3,807,148	+				+1.0
3,807,149	-				+0.2
3,807,259	+				-0.6
3,807,628	+		PS417_17430	0.24	-0.2
3,807,628	+				-0.3
3,807,628	+		PS417_17430	0.24	-1.0
3,807,629	-		PS417_17430	0.24	-0.5
3,807,629	-		PS417_17430	0.24	-0.1
3,807,716	-		PS417_17430	0.30	-0.8
3,807,839	-		PS417_17430	0.38	-0.5
3,808,400	-		PS417_17430	0.75	-0.5
3,808,675	+				-0.8
3,808,714	+				-0.5
3,808,715	-				-0.7
3,808,715	-				-0.5
3,808,715	-				-0.1
3,808,718	+				-0.1
3,808,719	-				-0.3
3,808,771	+				+0.2
3,808,772	-				+0.5
3,808,834	+				-0.2
3,808,835	-				-0.1
3,808,835	-				+0.8
3,808,835	-				-0.2
3,808,895	+				+1.5
3,809,037	-				-0.3
3,809,273	+		PS417_17435	0.21	-0.2
3,809,273	+		PS417_17435	0.21	+0.0
3,809,274	-		PS417_17435	0.21	-0.1
3,809,334	-		PS417_17435	0.24	-0.1
3,809,408	+		PS417_17435	0.29	-0.9
3,809,408	+		PS417_17435	0.29	+1.0
3,809,409	-		PS417_17435	0.29	-0.9
3,809,672	+		PS417_17435	0.43	-0.2
3,809,706	-		PS417_17435	0.45	-2.0