Strain Fitness in Pseudomonas simiae WCS417 around PS417_14455
Experiment: TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1 |
---|---|---|---|---|---|
remove | |||||
3,158,386 | + | +0.4 | |||
3,158,835 | + | -0.0 | |||
3,158,851 | - | -0.1 | |||
3,158,851 | - | -0.4 | |||
3,158,958 | + | PS417_14455 | 0.18 | -0.6 | |
3,158,958 | + | -1.1 | |||
3,158,958 | + | PS417_14455 | 0.18 | -0.6 | |
3,158,958 | + | PS417_14455 | 0.18 | -0.3 | |
3,159,328 | + | -0.2 | |||
3,159,330 | + | -0.2 | |||
3,159,331 | - | -0.4 | |||
3,159,895 | + | -0.3 | |||
3,160,128 | + | PS417_14465 | 0.57 | +0.2 | |
3,160,304 | - | -0.0 | |||
3,160,315 | - | +0.2 | |||
3,160,315 | - | -0.2 |
Or see this region's nucleotide sequence