Strain Fitness in Pseudomonas simiae WCS417 around PS417_12475

Experiment: TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1
2,712,599	+		PS417_12470	0.27	+0.4
2,712,704	+		PS417_12470	0.36	-0.4
2,712,704	+		PS417_12470	0.36	-0.1
2,712,705	-		PS417_12470	0.36	-0.7
2,712,705	-		PS417_12470	0.36	+0.3
2,712,705	-		PS417_12470	0.36	-0.3
2,712,859	-		PS417_12470	0.47	+0.6
2,712,923	+		PS417_12470	0.52	-0.3
2,712,987	-		PS417_12470	0.57	-0.2
2,713,041	+		PS417_12470	0.61	+0.0
2,713,056	+		PS417_12470	0.63	-0.3
2,713,056	+		PS417_12470	0.63	-0.1
2,713,057	-		PS417_12470	0.63	-0.8
2,713,112	+		PS417_12470	0.67	+0.0
2,713,112	+		PS417_12470	0.67	-0.3
2,713,173	-		PS417_12470	0.72	+0.3
2,713,475	+				-0.5
2,713,475	+				+0.2
2,713,475	+				-1.3
2,713,500	+				-0.2
2,713,501	-				-0.6
2,713,501	-				+0.1
2,713,501	-				-0.1
2,713,523	-				-0.6
2,713,547	+				+0.2
2,713,589	+				+0.1
2,713,590	-				-0.0
2,713,743	-		PS417_12475	0.20	+0.3
2,713,778	+		PS417_12475	0.25	-0.4
2,713,938	+		PS417_12475	0.46	+0.0
2,713,938	+		PS417_12475	0.46	+0.2
2,713,938	+		PS417_12475	0.46	-0.7
2,713,939	-		PS417_12475	0.47	-0.8
2,713,939	-				+0.4
2,713,939	-		PS417_12475	0.47	+0.5
2,713,948	+		PS417_12475	0.48	-0.1
2,713,955	+		PS417_12475	0.49	+0.4
2,713,955	+		PS417_12475	0.49	-0.6
2,713,973	+		PS417_12475	0.51	-0.6
2,713,973	+		PS417_12475	0.51	+0.9
2,714,082	+		PS417_12475	0.66	+0.3
2,714,082	+		PS417_12475	0.66	+1.1
2,714,083	-		PS417_12475	0.66	+0.9
2,714,086	+		PS417_12475	0.66	+1.3
2,714,087	-		PS417_12475	0.66	-0.2
2,714,144	+		PS417_12475	0.74	+1.5
2,714,145	-		PS417_12475	0.74	+0.6
2,714,196	-		PS417_12475	0.81	-0.0
2,714,216	-		PS417_12475	0.84	+1.5
2,714,282	-				+0.2
2,714,282	-				-1.2
2,714,364	+				+0.2
2,714,600	+		PS417_12480	0.33	-1.3
2,714,600	+				+1.6
2,714,601	-		PS417_12480	0.33	+0.3
2,714,626	+		PS417_12480	0.37	-0.2
2,714,645	+		PS417_12480	0.39	-0.1
2,714,714	+		PS417_12480	0.49	+0.5
2,714,781	+		PS417_12480	0.59	+0.3
2,714,785	+		PS417_12480	0.60	+0.3
2,714,785	+		PS417_12480	0.60	-0.8
2,714,852	+		PS417_12480	0.70	-0.2
2,714,944	-		PS417_12480	0.83	-0.1
2,715,086	-				-0.7
2,715,209	+				+1.1
2,715,267	-		PS417_12485	0.20	-0.3
2,715,270	+		PS417_12485	0.20	+0.7
2,715,271	-		PS417_12485	0.21	-0.2
2,715,318	+		PS417_12485	0.27	-0.2