Strain Fitness in Pseudomonas simiae WCS417 around PS417_00550

Experiment: TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1
108,576	-				+0.4
108,623	+				+0.1
108,953	-				+0.1
108,953	-				-0.1
108,953	-				-0.2
108,965	-				-0.8
109,003	+				-0.1
109,003	+				+0.2
109,004	-				-0.8
109,006	+				+0.3
109,006	+				-0.2
109,007	-				-0.0
109,033	+				+0.4
109,237	-		PS417_00545	0.87	-1.2
109,239	-		PS417_00545	0.88	-0.1
109,239	-		PS417_00545	0.88	-0.1
109,324	+				+0.9
109,324	+				+0.5
109,324	+				+0.5
109,325	-				+0.2
109,349	+				-0.1
109,372	+				+0.1
109,373	-				+0.1
109,693	-		PS417_00550	0.78	+0.2
109,730	+				+0.4
109,731	-				+0.2
109,768	+				+0.1
109,773	-				-0.2
109,773	-				+0.2
109,781	-				-0.3
109,823	+				-0.3
109,823	+				-0.5
109,861	+				-0.1
109,863	+				-0.2
109,872	+				+0.1
109,873	-				-0.1
109,942	+				-0.1
109,942	+				-0.4
109,943	-				+0.1
109,943	-				+0.2
109,943	-				-1.8
109,943	-				-0.5
109,943	-				+0.1
109,943	-				-0.1
109,943	-				-0.0
109,943	-				+0.2
109,943	-				+0.2
109,943	-				+0.0
110,051	+				+0.0
110,052	-				-0.3
110,052	-				+1.0
110,163	+				-0.3
110,203	+				+0.5
110,204	-				+0.2
110,204	-				+0.6
110,322	-		PS417_00555	0.18	-0.1
110,463	+		PS417_00555	0.27	+0.2
110,463	+		PS417_00555	0.27	-0.4
110,464	-		PS417_00555	0.27	-0.5
110,464	-		PS417_00555	0.27	-0.3
110,500	+		PS417_00555	0.30	-0.9
110,501	-		PS417_00555	0.30	+0.6
110,501	-		PS417_00555	0.30	-0.4
110,504	+		PS417_00555	0.30	-0.8
110,505	-		PS417_00555	0.30	+0.1
110,568	+		PS417_00555	0.34	-0.2
110,568	+		PS417_00555	0.34	-0.9
110,568	+		PS417_00555	0.34	-0.3
110,569	-		PS417_00555	0.34	+0.9
110,569	-		PS417_00555	0.34	-0.5
110,694	+		PS417_00555	0.43	-0.3
110,695	-		PS417_00555	0.43	-0.9