Strain Fitness in Pseudomonas putida KT2440 around PP_1605

Experiment: C.elegans, mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-2
1,799,236	-				+0.3
1,799,350	+		PP_1605	0.23	-1.3
1,799,512	+		PP_1605	0.49	-1.1
1,799,513	-		PP_1605	0.49	-0.5
1,799,749	+		PP_1605	0.87	-2.2
1,799,749	+		PP_1605	0.87	-1.8
1,799,965	+				-3.2
1,799,965	+				-0.7
1,799,966	-				+0.9
1,799,966	-				+0.9
1,799,969	+				+0.5
1,800,004	+				-0.6