Strain Fitness in Pseudomonas putida KT2440 around PP_0059

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
68,326	+				-0.8
68,327	-				+0.8
68,342	-				-2.4
68,617	+		PP_0058	0.17	-2.4
68,618	-		PP_0058	0.17	-2.8
68,634	+		PP_0058	0.19	-0.9
68,634	+		PP_0058	0.19	-1.6
68,781	+		PP_0058	0.37	-3.1
68,859	+		PP_0058	0.47	-3.6
68,931	+		PP_0058	0.56	-2.8
68,931	+		PP_0058	0.56	+0.5
68,932	-		PP_0058	0.57	-0.7
68,932	-		PP_0058	0.57	-2.7
68,932	-		PP_0058	0.57	-2.0
68,935	+		PP_0058	0.57	-1.9
68,935	+		PP_0058	0.57	-4.0
68,935	+		PP_0058	0.57	-4.0
68,935	+		PP_0058	0.57	-1.8
68,935	+		PP_0058	0.57	-0.9
68,935	+		PP_0058	0.57	-2.3
68,935	+		PP_0058	0.57	-3.7
68,935	+		PP_0058	0.57	-1.5
68,936	-		PP_0058	0.57	-0.7
68,936	-		PP_0058	0.57	-2.9
68,936	-		PP_0058	0.57	-1.1
68,936	-		PP_0058	0.57	-0.2
68,936	-		PP_0058	0.57	-1.2
68,936	-		PP_0058	0.57	-1.8
68,964	-		PP_0058	0.61	-2.6
68,977	+		PP_0058	0.62	-0.3
69,071	-		PP_0058	0.74	-1.9
69,071	-		PP_0058	0.74	-1.1
69,121	+		PP_0058	0.81	+0.3
69,122	-		PP_0058	0.81	-2.3
69,139	+		PP_0058	0.83	-2.3
69,140	-		PP_0058	0.83	-1.6
69,220	+				-1.0
69,258	-				-2.5
69,258	-				-1.2
69,268	-				-0.6