Strain Fitness in Pseudomonas putida KT2440 around PP_4726

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
5,373,490	+				+1.4
5,373,491	-				-0.4
5,374,699	-		PP_4726	0.34	-1.5
5,374,727	-		PP_4726	0.37	-1.2
5,374,807	-		PP_4726	0.44	-1.3
5,375,077	-		PP_4726	0.68	-2.7
5,375,236	-		PP_4726	0.82	-3.4
5,375,236	-		PP_4726	0.82	+0.7
5,375,422	-				-0.8
5,375,422	-				-1.6
5,375,424	+				-0.5
5,375,425	-				-2.8
5,375,441	-				-3.7
5,375,441	-				+0.4
5,375,441	-				-1.5
5,375,591	-				-1.0
5,375,641	-				-1.8
5,375,758	-				-0.8
5,375,758	-				+0.3