Strain Fitness in Pseudomonas putida KT2440 around PP_0682

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
796,086	-				+1.0
796,360	-				+1.5
796,382	+				-0.6
796,383	-				-1.0
796,392	-				+0.6
796,392	-				-0.1
796,683	-		PP_0681	0.66	-2.3
796,776	-				-0.9
796,852	+				-1.1
796,852	+				+0.5
796,853	-				+0.1
796,927	+				+0.2
796,928	-				+0.8
796,944	+				-0.4
796,944	+				+0.8
796,945	-				+0.4
796,945	-				-0.6
796,945	-				-1.8
796,962	+				-1.3
796,963	-				-1.0
796,997	-				-1.1
797,015	+				+1.7
797,015	+				-0.5
797,015	+				+0.6
797,016	-				-0.1
797,016	-				+0.3
797,016	-				-0.7
797,045	+		PP_0682	0.12	+1.0
797,045	+		PP_0682	0.12	-1.7
797,046	-		PP_0682	0.12	-1.2
797,390	+		PP_0682	0.82	-1.9
797,402	+		PP_0682	0.85	-0.2
797,402	+		PP_0682	0.85	-0.4
797,402	+		PP_0682	0.85	-0.7
797,403	-		PP_0682	0.85	-1.1
797,403	-		PP_0682	0.85	-0.7
797,533	+				-0.3
797,591	-				-0.5
797,718	+		PP_0683	0.42	-1.0
797,719	-		PP_0683	0.43	-0.2
797,719	-		PP_0683	0.43	+1.3
797,719	-		PP_0683	0.43	+0.9
797,940	+				-0.8
797,940	+				-0.2
797,967	-				-0.7
798,070	+				+0.4
798,070	+				-1.7
798,070	+				+0.4
798,399	+		PP_0684	0.60	+1.1
798,400	-		PP_0684	0.60	+0.4
798,407	-				-1.0
798,448	+				+1.3
798,448	+		PP_0684	0.68	+0.4