Strain Fitness in Pseudomonas putida KT2440 around PP_4202

Experiment: Tetrahymena sp., Mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetrahymena sp., Mixed culture-1
4,746,025	+				-1.0
4,746,026	-				-0.2
4,746,063	+				-0.5
4,746,063	+				-0.4
4,746,063	+				-1.0
4,746,063	+				-2.7
4,746,063	+				-1.0
4,746,064	-				-0.5
4,746,064	-				-1.9
4,746,065	+				-1.6
4,747,788	-				-0.1
4,747,788	-				+1.2
4,747,828	-				-0.7
4,747,949	-				+0.2
4,747,995	-				-0.5
4,747,995	-				-0.2
4,748,003	-				-0.4
4,748,003	-				+1.5
4,748,025	-				-0.4
4,748,025	-				+1.3
4,748,048	-				-0.2
4,748,172	+				+1.8
4,748,172	+				-0.3
4,748,172	+				-1.0
4,748,176	+				+0.5
4,748,176	+				-1.1
4,748,176	+				+0.7
4,748,178	+				+1.9
4,748,178	+				+0.9
4,748,204	+				+0.1
4,748,224	+				+0.9
4,748,224	+				+1.5
4,748,242	+				-0.7
4,748,242	+				-1.1
4,748,242	+				-0.8
4,748,270	+				-0.9