Experiment: Stem-Atlantic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS02445 and DZA65_RS02450 are separated by 21 nucleotides DZA65_RS02450 and DZA65_RS02455 overlap by 4 nucleotides
DZA65_RS02445: DZA65_RS02445 - FAD-dependent 2-octaprenylphenol hydroxylase, at 527,078 to 528,289
_RS02445
DZA65_RS02450: DZA65_RS02450 - 2-octaprenyl-6-methoxyphenyl hydroxylase, at 528,311 to 529,489
_RS02450
DZA65_RS02455: DZA65_RS02455 - Xaa-Pro aminopeptidase, at 529,486 to 530,814
_RS02455
Position (kb) 528
529
530 Strain fitness (log2 ratio) -2
-1
0
1 at 528.290 kb on - strand at 528.290 kb on - strand at 529.623 kb on - strand, within DZA65_RS02455 at 529.656 kb on - strand, within DZA65_RS02455 at 529.656 kb on - strand, within DZA65_RS02455 at 529.656 kb on - strand, within DZA65_RS02455 at 529.656 kb on - strand, within DZA65_RS02455 at 529.656 kb on - strand, within DZA65_RS02455 at 529.656 kb on - strand, within DZA65_RS02455 at 529.656 kb on - strand, within DZA65_RS02455 at 529.656 kb on - strand, within DZA65_RS02455 at 529.656 kb on - strand, within DZA65_RS02455 at 529.656 kb on - strand, within DZA65_RS02455 at 529.774 kb on - strand, within DZA65_RS02455 at 529.774 kb on - strand, within DZA65_RS02455 at 529.774 kb on - strand, within DZA65_RS02455 at 529.879 kb on + strand, within DZA65_RS02455 at 530.016 kb on - strand, within DZA65_RS02455 at 530.025 kb on - strand, within DZA65_RS02455 at 530.088 kb on - strand, within DZA65_RS02455 at 530.088 kb on - strand, within DZA65_RS02455 at 530.088 kb on - strand, within DZA65_RS02455 at 530.088 kb on - strand, within DZA65_RS02455 at 530.088 kb on - strand, within DZA65_RS02455 at 530.133 kb on - strand, within DZA65_RS02455 at 530.133 kb on - strand, within DZA65_RS02455 at 530.133 kb on - strand, within DZA65_RS02455 at 530.133 kb on - strand, within DZA65_RS02455 at 530.133 kb on - strand, within DZA65_RS02455 at 530.193 kb on - strand, within DZA65_RS02455 at 530.305 kb on - strand, within DZA65_RS02455 at 530.305 kb on - strand at 530.305 kb on - strand, within DZA65_RS02455 at 530.312 kb on - strand, within DZA65_RS02455 at 530.415 kb on - strand, within DZA65_RS02455 at 530.439 kb on - strand, within DZA65_RS02455 at 530.439 kb on - strand, within DZA65_RS02455
Per-strain Table
Position Strand Gene LocusTag Fraction Stem-Atlantic remove 528,290 - -0.4 528,290 - -1.1 529,623 - DZA65_RS02455 0.10 -0.6 529,656 - DZA65_RS02455 0.13 +0.8 529,656 - DZA65_RS02455 0.13 -2.1 529,656 - DZA65_RS02455 0.13 -1.9 529,656 - DZA65_RS02455 0.13 -0.2 529,656 - DZA65_RS02455 0.13 +1.5 529,656 - DZA65_RS02455 0.13 -1.5 529,656 - DZA65_RS02455 0.13 -1.5 529,656 - DZA65_RS02455 0.13 +0.5 529,656 - DZA65_RS02455 0.13 -1.4 529,656 - DZA65_RS02455 0.13 +0.7 529,774 - DZA65_RS02455 0.22 -1.2 529,774 - DZA65_RS02455 0.22 +0.9 529,774 - DZA65_RS02455 0.22 +0.8 529,879 + DZA65_RS02455 0.30 -1.5 530,016 - DZA65_RS02455 0.40 -0.2 530,025 - DZA65_RS02455 0.41 -0.5 530,088 - DZA65_RS02455 0.45 -0.7 530,088 - DZA65_RS02455 0.45 -1.6 530,088 - DZA65_RS02455 0.45 -0.5 530,088 - DZA65_RS02455 0.45 -2.1 530,088 - DZA65_RS02455 0.45 +0.0 530,133 - DZA65_RS02455 0.49 -0.3 530,133 - DZA65_RS02455 0.49 -1.2 530,133 - DZA65_RS02455 0.49 -1.0 530,133 - DZA65_RS02455 0.49 +1.4 530,133 - DZA65_RS02455 0.49 +0.8 530,193 - DZA65_RS02455 0.53 +1.4 530,305 - DZA65_RS02455 0.62 +1.1 530,305 - -1.7 530,305 - DZA65_RS02455 0.62 -0.2 530,312 - DZA65_RS02455 0.62 -0.8 530,415 - DZA65_RS02455 0.70 +0.2 530,439 - DZA65_RS02455 0.72 -0.6 530,439 - DZA65_RS02455 0.72 +0.1
Or see this region's nucleotide sequence