Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS00340

Experiment: Stem-Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Atlantic
81,721	+		DZA65_RS00330	0.85	-0.8
81,721	+		DZA65_RS00330	0.85	+0.0
81,721	+		DZA65_RS00330	0.85	+0.9
81,721	+		DZA65_RS00330	0.85	+1.4
81,721	+		DZA65_RS00330	0.85	-0.6
81,721	+		DZA65_RS00330	0.85	+1.2
81,722	-		DZA65_RS00330	0.85	+1.3
81,722	-		DZA65_RS00330	0.85	-0.5
81,722	-		DZA65_RS00330	0.85	+1.4
81,722	-		DZA65_RS00330	0.85	-1.6
81,722	-		DZA65_RS00330	0.85	+0.2
81,722	-		DZA65_RS00330	0.85	+1.1
81,731	+		DZA65_RS00330	0.85	+1.2
81,731	+		DZA65_RS00330	0.85	-0.1
81,731	+		DZA65_RS00330	0.85	-1.1
81,731	+		DZA65_RS00330	0.85	+0.4
81,731	+		DZA65_RS00330	0.85	-0.7
81,732	-		DZA65_RS00330	0.86	-0.4
81,732	-		DZA65_RS00330	0.86	-1.4
81,786	+				-0.0
81,786	+				+1.2
81,792	+				+1.3
81,793	-				-0.1
81,814	-				+0.4
81,846	+				+1.8
81,846	+				-0.4
81,846	+				-2.9
81,847	-				-0.0
81,894	+				-1.1
81,895	-				-0.8
81,900	-				+0.9
81,900	-				+0.8
81,947	+				+0.4
81,947	+				-0.2
81,948	-				+0.7
81,948	-				+0.6
81,948	-				+1.2
81,948	-				-2.0
81,970	-				+1.2
81,975	+				+0.5
81,976	-				-0.9
81,976	-				+0.2
81,976	-				-0.8
81,978	+				-0.8
81,978	+				+0.8
81,978	+				+1.6
81,978	+				+0.5
81,978	+				-0.8
81,978	+				+0.9
81,978	+				-0.0
81,978	+				+0.4
81,978	+				-0.4
81,978	+				+1.9
81,979	-				-1.0
81,979	-				+2.2
81,979	-				-0.0
81,979	-				+0.8
81,979	-				+0.8
81,979	-				+0.4
81,979	-				-1.9
81,979	-				+0.8
81,979	-				-0.6
81,979	-				+0.2
81,979	-				-2.1
81,979	-				-0.7
81,982	+				+1.5
81,982	+				-1.3
81,982	+				-0.1
81,982	+				+0.2
81,982	+				+0.0
81,982	+				-1.1
81,982	+				-0.1
81,982	+				+0.7
81,982	+				+1.2
81,982	+				-0.6
81,982	+				-0.4
81,982	+				-0.3
81,982	+				-0.8
81,982	+				-0.4
81,982	+				-0.1
81,982	+				+2.2
81,982	+				+1.2
81,982	+				+0.6
81,982	+				-0.5
81,982	+				-0.7
81,982	+				+0.4
81,982	+				-0.1
81,982	+				-2.3
81,982	+				+1.2
81,983	-				+0.0
81,983	-				-0.2
81,983	-				+0.6
81,983	-				+1.2
81,983	-				+0.9
81,983	-				-0.2
81,983	-				+1.2
81,983	-				-1.0
81,983	-				+0.5
81,983	-				-1.1
81,983	-				-0.4
81,983	-				+1.0
81,983	-				-0.0
81,983	-				-0.4
81,983	-				+0.3
81,983	-				-0.4
82,116	+		DZA65_RS00335	0.29	-1.2
82,116	+		DZA65_RS00335	0.29	-0.9
82,116	+		DZA65_RS00335	0.29	+0.3
82,116	+		DZA65_RS00335	0.29	-0.3
82,116	+		DZA65_RS00335	0.29	-1.6
82,116	+		DZA65_RS00335	0.29	+1.6
82,116	+		DZA65_RS00335	0.29	+0.5
82,116	+		DZA65_RS00335	0.29	+2.2
82,116	+		DZA65_RS00335	0.29	-2.1
82,116	+		DZA65_RS00335	0.29	-0.8
82,116	+		DZA65_RS00335	0.29	-1.1
82,116	+		DZA65_RS00335	0.29	+1.2
82,116	+		DZA65_RS00335	0.29	+0.6
82,117	-		DZA65_RS00335	0.29	-0.1
82,117	-		DZA65_RS00335	0.29	-0.8
82,117	-		DZA65_RS00335	0.29	+0.8
82,117	-		DZA65_RS00335	0.29	-0.2
82,117	-		DZA65_RS00335	0.29	-0.4
82,117	-		DZA65_RS00335	0.29	-1.1
82,117	-		DZA65_RS00335	0.29	+0.4
82,117	-		DZA65_RS00335	0.29	+0.0
82,117	-		DZA65_RS00335	0.29	-1.0
82,161	+		DZA65_RS00335	0.37	-0.1
82,161	+		DZA65_RS00335	0.37	-1.0
82,162	-		DZA65_RS00335	0.37	+0.6
82,162	-		DZA65_RS00335	0.37	-1.4
82,162	-		DZA65_RS00335	0.37	-0.3
82,162	-		DZA65_RS00335	0.37	-1.1
82,162	-		DZA65_RS00335	0.37	+1.4
82,258	+		DZA65_RS00335	0.53	+0.1
82,259	-		DZA65_RS00335	0.54	-1.4
82,345	+		DZA65_RS00335	0.69	-0.2
82,345	+		DZA65_RS00335	0.69	+1.0
82,345	+		DZA65_RS00335	0.69	+0.4
82,345	+		DZA65_RS00335	0.69	-2.5
82,345	+		DZA65_RS00335	0.69	+0.4
82,345	+		DZA65_RS00335	0.69	+1.2
82,345	+		DZA65_RS00335	0.69	-0.7
82,345	+		DZA65_RS00335	0.69	+1.2
82,345	+		DZA65_RS00335	0.69	+0.4
82,346	-		DZA65_RS00335	0.69	-0.4
82,346	-		DZA65_RS00335	0.69	-1.5
82,346	-		DZA65_RS00335	0.69	+0.3
82,346	-		DZA65_RS00335	0.69	+0.8
82,346	-		DZA65_RS00335	0.69	+1.2
82,346	-		DZA65_RS00335	0.69	-1.1
82,346	-		DZA65_RS00335	0.69	-0.4
82,346	-		DZA65_RS00335	0.69	+0.3
82,346	-		DZA65_RS00335	0.69	-1.4
82,381	+		DZA65_RS00335	0.75	-0.9
82,384	+		DZA65_RS00335	0.75	-0.7
82,384	+		DZA65_RS00335	0.75	-1.1
82,384	+		DZA65_RS00335	0.75	-1.0
82,384	+		DZA65_RS00335	0.75	+1.2
82,384	+		DZA65_RS00335	0.75	+0.3
82,385	-		DZA65_RS00335	0.76	-1.1
82,385	-		DZA65_RS00335	0.76	+0.7
82,389	+		DZA65_RS00335	0.76	-2.7
82,389	+		DZA65_RS00335	0.76	+0.2
82,390	-		DZA65_RS00335	0.76	-1.1
82,390	-		DZA65_RS00335	0.76	-0.1
82,390	-		DZA65_RS00335	0.76	+0.2
82,468	+				-2.0
82,468	+				+0.4
82,469	-				+0.9
82,469	-				-1.1
82,469	-				-2.0
82,528	+				+1.2
82,528	+				-0.1
82,528	+				+0.3
82,528	+				+0.1
82,528	+				-1.1
82,528	+				-1.4
82,528	+				+0.8
82,529	-				-0.2
82,529	-				-0.6
82,529	-				-0.7
82,529	-				-1.4
82,529	-				-1.4
82,529	-				-0.3
82,529	-				-0.0
82,574	+				-0.9
82,574	+				+0.5
82,613	-				+1.2
82,631	+				+1.3
82,661	+				-1.1
82,661	+				-0.6
82,662	-				-0.2
82,671	+				-0.3
82,671	+				+1.4
82,671	+				-2.4
82,671	+				-0.4
82,671	+				+0.9
82,671	+				+0.3
82,671	+				+1.9
82,671	+				-1.0
82,671	+				-0.4
82,672	-				-2.5
82,672	-				-0.4
82,672	-				+0.2
82,672	-				+0.4
82,672	-				+1.8
82,672	-				-0.8
82,672	-				+0.4
82,672	-				+0.2
82,672	-				+0.9
82,672	-				+0.6
82,672	-				+0.2
82,672	-				+1.2
82,672	-				+0.3
82,672	-				+0.0
82,672	-				+1.9
82,672	-				-2.6
82,673	+				+1.8
82,673	+				+0.4
82,673	+				-0.2
82,673	+				+0.4
82,673	+				-1.3
82,673	+				+1.2
82,673	+				+0.5
82,673	+				+0.9
82,673	+				-0.4
82,673	+				+0.4
82,673	+				+0.2
82,673	+				+2.8
82,673	+				-0.8
82,673	+				-0.2
82,673	+				+0.8
82,674	-				-0.2
82,674	-				+0.6
82,674	-				-0.1
82,674	-				-1.2
82,674	-				-1.1
82,674	-				+0.9
82,674	-				-2.0
82,674	-				+0.2
82,692	+				+1.5
82,692	+				-0.7
82,692	+				+1.2
82,693	-				+2.2
82,693	-				+0.7
82,693	-				+1.3
82,693	-				-0.7
82,693	-				-2.5
82,699	+				-0.8
82,699	+				+0.2
82,699	+				-0.1
82,699	+				+1.2
82,699	+				-1.7
82,700	-				-1.5
82,700	-				+1.0
82,706	+				-1.8
82,706	+				+0.8
82,706	+				-0.4
82,706	+				+0.7
82,706	+				-1.1
82,707	-				-0.4
82,707	-				-2.3
82,707	-				-0.0
82,707	-				-0.7
82,707	-				+1.1
82,720	+				+0.2
82,720	+				+0.5
82,720	+				-1.0
82,720	+				-0.8
82,721	-				+0.8
82,721	-				-0.7
82,721	-				-0.2
82,721	-				-0.2
82,721	-				-1.8
82,727	+				-0.3
82,727	+				-1.8
82,727	+				+0.2
82,727	+				+0.7
82,727	+				-0.1
82,727	+				-0.4
82,727	+				+2.4
82,727	+				-0.6
82,727	+				+0.0
82,727	+				+0.2
82,727	+				-0.4
82,728	-				-0.6
82,728	-				+1.8
82,728	-				-0.7
82,728	-				+0.8
82,728	-				+0.0
82,728	-				+0.0
82,728	-				+1.6
82,728	-				+0.2
82,729	+				+0.9
82,729	+				-0.1
82,729	+				+0.7
82,729	+				-0.6
82,729	+				+0.2
82,729	+				-0.1
82,729	+				-0.1
82,729	+				-0.3
82,729	+				+0.6
82,729	+				+1.2
82,729	+				+2.5
82,729	+				+0.3
82,729	+				+1.4
82,729	+				+1.8
82,730	-				-1.4
82,730	-				-0.8
82,730	-				-1.1
82,730	-				+1.2
82,730	-				-0.7
82,730	-				-1.1
82,730	-				-1.4
82,730	-				+0.2
82,730	-				-0.7
82,730	-				-1.1
82,730	-				-0.7
82,988	+				+0.6
83,034	+				-0.1
83,035	-				+0.6
83,039	+				-0.4
83,053	+				+0.8
83,053	+				+0.5
83,053	+				+0.1
83,054	-				+0.2
83,092	+				+1.1
83,092	+				-0.4
83,093	-				+2.8
83,093	-				+0.4
83,096	+				+0.1
83,096	+				-1.8
83,096	+				-2.3
83,096	+				+1.4
83,096	+				-0.8
83,097	-				-0.5
83,097	-				-1.4
83,097	-				+0.2
83,210	+		DZA65_RS00345	0.13	-1.8
83,210	+		DZA65_RS00345	0.13	+1.2
83,210	+		DZA65_RS00345	0.13	-0.4
83,210	+		DZA65_RS00345	0.13	+0.9
83,210	+		DZA65_RS00345	0.13	-2.6
83,211	-		DZA65_RS00345	0.13	-0.4
83,211	-		DZA65_RS00345	0.13	+0.2
83,211	-		DZA65_RS00345	0.13	+1.8
83,211	-		DZA65_RS00345	0.13	-0.8
83,211	-		DZA65_RS00345	0.13	+0.2
83,211	-		DZA65_RS00345	0.13	+0.4
83,211	-		DZA65_RS00345	0.13	+0.9
83,211	-		DZA65_RS00345	0.13	-2.1
83,226	-		DZA65_RS00345	0.14	-1.8
83,292	-		DZA65_RS00345	0.22	-1.0
83,328	+		DZA65_RS00345	0.26	-0.1
83,328	+		DZA65_RS00345	0.26	-0.4
83,328	+		DZA65_RS00345	0.26	+1.2
83,328	+		DZA65_RS00345	0.26	-0.8
83,328	+		DZA65_RS00345	0.26	-0.4
83,328	+		DZA65_RS00345	0.26	+1.0
83,328	+		DZA65_RS00345	0.26	+0.8
83,329	-		DZA65_RS00345	0.26	+0.2
83,329	-		DZA65_RS00345	0.26	+0.2
83,329	-		DZA65_RS00345	0.26	+0.3
83,329	-		DZA65_RS00345	0.26	-0.6
83,329	-		DZA65_RS00345	0.26	-2.1
83,329	-		DZA65_RS00345	0.26	-0.2
83,426	+		DZA65_RS00345	0.37	+0.5
83,427	-		DZA65_RS00345	0.37	-0.4
83,465	+		DZA65_RS00345	0.41	-2.1
83,465	+		DZA65_RS00345	0.41	-1.1
83,465	+		DZA65_RS00345	0.41	+0.8
83,466	-		DZA65_RS00345	0.41	+0.7
83,552	+		DZA65_RS00345	0.51	-1.3
83,552	+		DZA65_RS00345	0.51	+1.2
83,610	+		DZA65_RS00345	0.57	+0.0
83,610	+		DZA65_RS00345	0.57	-1.4
83,774	+		DZA65_RS00345	0.76	+0.6
83,774	+		DZA65_RS00345	0.76	+0.0
83,775	-		DZA65_RS00345	0.76	+1.7
83,775	-		DZA65_RS00345	0.76	+1.2
83,916	+				+0.0
83,916	+				+1.8
83,916	+				-0.4
83,916	+				+1.2
83,917	-				+1.0
83,942	-				-1.6
83,952	+				+1.2
83,952	+				-1.8
83,952	+				+0.2
83,952	+				-0.4
83,952	+				-0.8
83,952	+				+0.9
83,952	+				-0.9
83,952	+				+0.2
83,952	+				+0.7
83,952	+				+0.2
83,952	+				-1.0
83,952	+				+3.1
83,952	+				+0.0
83,952	+				+0.4
83,952	+				-0.0
83,952	+				+1.2
83,952	+				-2.1
83,952	+				-2.0
83,952	+				+1.2
83,952	+				+0.8
83,952	+				-0.6
83,952	+				+0.2
83,952	+				+1.6
83,952	+				-0.8
83,952	+				+0.2
83,952	+				+0.2
83,952	+				+0.4
83,952	+				+2.2
83,952	+				+0.8
83,952	+				+0.2
83,952	+				-0.3
83,953	-				-2.3
83,953	-				-0.8
83,953	-				-1.0
83,953	-				-0.8
83,953	-				-0.4
83,953	-				+0.4
83,953	-				-1.8
83,953	-				+1.2
83,953	-				-0.1
83,953	-				-1.1
83,953	-				+0.4
83,953	-				-0.6
83,953	-				-1.6
83,953	-				-0.4
83,953	-				-1.7
83,953	-				-1.0
83,953	-				+0.2
83,953	-				+1.0
83,953	-				+1.3
83,953	-				+1.2
83,953	-				+0.2
83,953	-				-1.3
83,953	-				-0.4
83,953	-				+3.0
83,953	-				+0.2
83,953	-				+0.2
83,953	-				+0.7
83,953	-				-0.1
83,953	-				+0.8
83,953	-				-0.4
83,953	-				+1.4
83,954	+				-1.1
83,954	+				+0.7
83,954	+				-0.8
83,954	+				+0.2
83,954	+				+0.2
83,954	+				-0.4
83,954	+				-1.4
83,954	+				+1.0
83,954	+				-1.0
83,954	+				-0.2
83,954	+				-1.3
83,954	+				+0.2
83,954	+				-2.0
83,954	+				+0.2
83,954	+				+1.2
83,954	+				-1.3
83,955	-				-0.8
83,955	-				-0.4
83,955	-				-1.4
83,955	-				+0.5
83,955	-				-2.0
83,955	-				-0.3
83,955	-				+1.2
83,955	-				-0.2
83,955	-				+0.8
83,955	-				+0.6
83,955	-				+0.5
83,955	-				+1.2
83,955	-				-0.1
83,955	-				+1.3
83,988	+				+0.2
83,988	+				+0.9