Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22525

Experiment: Stem-Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Atlantic
4,870,544	+		DZA65_RS22520	0.71	-1.4
4,870,578	-		DZA65_RS22520	0.72	-0.1
4,870,578	-		DZA65_RS22520	0.72	-2.1
4,870,578	-		DZA65_RS22520	0.72	-2.2
4,870,579	+		DZA65_RS22520	0.72	-0.6
4,870,579	+		DZA65_RS22520	0.72	-0.9
4,870,579	+		DZA65_RS22520	0.72	+1.4
4,870,579	+		DZA65_RS22520	0.72	-1.6
4,870,579	+		DZA65_RS22520	0.72	-0.1
4,870,579	+		DZA65_RS22520	0.72	-0.1
4,870,579	+		DZA65_RS22520	0.72	-1.4
4,870,579	+		DZA65_RS22520	0.72	-0.1
4,870,579	+		DZA65_RS22520	0.72	+0.1
4,870,579	+		DZA65_RS22520	0.72	-0.6
4,870,579	+		DZA65_RS22520	0.72	+0.3
4,870,579	+		DZA65_RS22520	0.72	-0.1
4,870,579	+		DZA65_RS22520	0.72	+0.4
4,870,579	+		DZA65_RS22520	0.72	+0.9
4,870,579	+		DZA65_RS22520	0.72	-1.1
4,870,579	+		DZA65_RS22520	0.72	-0.2
4,870,579	+		DZA65_RS22520	0.72	-0.6
4,870,579	+		DZA65_RS22520	0.72	-0.9
4,870,579	+		DZA65_RS22520	0.72	+0.4
4,870,579	+		DZA65_RS22520	0.72	+1.6
4,870,579	+		DZA65_RS22520	0.72	-0.6
4,870,579	+		DZA65_RS22520	0.72	-1.9
4,870,580	-		DZA65_RS22520	0.72	-1.4
4,870,580	-		DZA65_RS22520	0.72	+0.4
4,870,580	-		DZA65_RS22520	0.72	-0.1
4,870,580	-		DZA65_RS22520	0.72	-1.6
4,870,580	-		DZA65_RS22520	0.72	-2.3
4,870,580	-		DZA65_RS22520	0.72	-1.5
4,870,580	-		DZA65_RS22520	0.72	-0.8
4,870,580	-		DZA65_RS22520	0.72	-1.2
4,870,580	-		DZA65_RS22520	0.72	+1.7
4,870,580	-		DZA65_RS22520	0.72	-0.5
4,870,580	-		DZA65_RS22520	0.72	+0.4
4,870,580	-		DZA65_RS22520	0.72	-1.1
4,870,580	-		DZA65_RS22520	0.72	+1.9
4,870,580	-		DZA65_RS22520	0.72	-1.1
4,870,580	-		DZA65_RS22520	0.72	-0.8
4,870,580	-		DZA65_RS22520	0.72	+1.9
4,870,580	-		DZA65_RS22520	0.72	-0.9
4,870,580	-		DZA65_RS22520	0.72	-2.4
4,870,580	-		DZA65_RS22520	0.72	+1.5
4,870,580	-		DZA65_RS22520	0.72	-0.9
4,870,580	-		DZA65_RS22520	0.72	-0.1
4,870,601	+		DZA65_RS22520	0.73	+0.8
4,870,601	+		DZA65_RS22520	0.73	-2.2
4,870,601	+		DZA65_RS22520	0.73	-0.5
4,870,601	+		DZA65_RS22520	0.73	+0.0
4,870,601	+		DZA65_RS22520	0.73	-1.6
4,870,601	+		DZA65_RS22520	0.73	+1.5
4,870,601	+		DZA65_RS22520	0.73	-0.2
4,870,602	-		DZA65_RS22520	0.73	+0.2
4,870,602	-		DZA65_RS22520	0.73	-1.1
4,870,602	-		DZA65_RS22520	0.73	-0.3
4,870,602	-		DZA65_RS22520	0.73	-1.4
4,870,657	+		DZA65_RS22520	0.75	+1.4
4,870,657	+		DZA65_RS22520	0.75	-0.1
4,870,657	+		DZA65_RS22520	0.75	-0.1
4,870,658	-		DZA65_RS22520	0.75	-1.4
4,870,673	+		DZA65_RS22520	0.76	-0.5
4,870,673	+		DZA65_RS22520	0.76	+0.1
4,870,673	+		DZA65_RS22520	0.76	-0.1
4,870,673	+		DZA65_RS22520	0.76	-0.8
4,870,673	+		DZA65_RS22520	0.76	+0.1
4,870,673	+		DZA65_RS22520	0.76	+0.2
4,870,673	+		DZA65_RS22520	0.76	-0.4
4,870,673	+		DZA65_RS22520	0.76	-0.8
4,870,673	+		DZA65_RS22520	0.76	+0.4
4,870,673	+		DZA65_RS22520	0.76	+1.2
4,870,673	+		DZA65_RS22520	0.76	-1.0
4,870,673	+		DZA65_RS22520	0.76	+0.5
4,870,673	+		DZA65_RS22520	0.76	-0.6
4,870,674	-		DZA65_RS22520	0.76	+1.6
4,870,674	-		DZA65_RS22520	0.76	-0.1
4,870,674	-		DZA65_RS22520	0.76	-0.6
4,870,674	-		DZA65_RS22520	0.76	-0.6
4,870,674	-		DZA65_RS22520	0.76	+0.9
4,870,674	-		DZA65_RS22520	0.76	-1.5
4,870,674	-		DZA65_RS22520	0.76	+0.9
4,870,674	-		DZA65_RS22520	0.76	-2.1
4,870,674	-		DZA65_RS22520	0.76	+0.5
4,870,674	-		DZA65_RS22520	0.76	-0.3
4,870,674	-		DZA65_RS22520	0.76	-2.2
4,870,674	-		DZA65_RS22520	0.76	-0.5
4,870,674	-		DZA65_RS22520	0.76	+0.4
4,870,674	-		DZA65_RS22520	0.76	+2.5
4,870,826	+		DZA65_RS22520	0.83	-0.7
4,870,826	+		DZA65_RS22520	0.83	-0.3
4,870,826	+		DZA65_RS22520	0.83	+0.6
4,870,827	-		DZA65_RS22520	0.83	-1.6
4,870,827	-		DZA65_RS22520	0.83	+0.5
4,870,827	-		DZA65_RS22520	0.83	+1.5
4,870,837	+		DZA65_RS22520	0.83	+0.8
4,870,837	+		DZA65_RS22520	0.83	-0.2
4,870,838	-		DZA65_RS22520	0.83	+0.5
4,870,897	+		DZA65_RS22520	0.86	+0.1
4,870,897	+		DZA65_RS22520	0.86	+1.5
4,870,898	-		DZA65_RS22520	0.86	-0.1
4,870,898	-		DZA65_RS22520	0.86	-0.6
4,870,898	-		DZA65_RS22520	0.86	+0.1
4,870,970	+				-0.1
4,870,970	+		DZA65_RS22520	0.89	-2.1
4,870,971	-		DZA65_RS22520	0.89	-1.5
4,870,971	-		DZA65_RS22520	0.89	-1.6
4,870,971	-		DZA65_RS22520	0.89	+0.1
4,870,972	+		DZA65_RS22520	0.89	-0.3
4,870,972	+		DZA65_RS22520	0.89	-1.1
4,870,972	+		DZA65_RS22520	0.89	+0.8
4,870,972	+		DZA65_RS22520	0.89	-0.5
4,870,972	+		DZA65_RS22520	0.89	+0.9
4,870,972	+		DZA65_RS22520	0.89	+0.5
4,870,972	+		DZA65_RS22520	0.89	-0.1
4,870,972	+		DZA65_RS22520	0.89	+0.2
4,870,972	+		DZA65_RS22520	0.89	-0.2
4,870,972	+		DZA65_RS22520	0.89	+0.9
4,870,972	+		DZA65_RS22520	0.89	-0.6
4,870,972	+		DZA65_RS22520	0.89	-2.5
4,870,972	+		DZA65_RS22520	0.89	-1.5
4,870,972	+		DZA65_RS22520	0.89	+1.5
4,870,972	+		DZA65_RS22520	0.89	+1.4
4,870,972	+		DZA65_RS22520	0.89	-1.4
4,870,972	+		DZA65_RS22520	0.89	+0.7
4,870,972	+		DZA65_RS22520	0.89	+0.9
4,870,972	+		DZA65_RS22520	0.89	+3.9
4,870,972	+		DZA65_RS22520	0.89	+0.5
4,870,972	+		DZA65_RS22520	0.89	-0.8
4,870,973	-		DZA65_RS22520	0.89	-1.4
4,870,973	-		DZA65_RS22520	0.89	-0.6
4,870,973	-		DZA65_RS22520	0.89	+0.1
4,870,973	-		DZA65_RS22520	0.89	-0.6
4,870,973	-		DZA65_RS22520	0.89	+0.1
4,870,973	-		DZA65_RS22520	0.89	-0.5
4,870,973	-		DZA65_RS22520	0.89	+0.9
4,870,973	-		DZA65_RS22520	0.89	-1.6
4,870,973	-		DZA65_RS22520	0.89	+3.1
4,870,973	-		DZA65_RS22520	0.89	-1.4
4,870,973	-		DZA65_RS22520	0.89	-0.3
4,870,973	-		DZA65_RS22520	0.89	-0.3
4,870,973	-		DZA65_RS22520	0.89	-1.4
4,870,973	-		DZA65_RS22520	0.89	+0.6
4,870,973	-		DZA65_RS22520	0.89	-0.1
4,870,979	+		DZA65_RS22520	0.89	-0.1
4,871,091	-				-0.1
4,871,112	+				+0.1
4,871,112	+				+0.2
4,871,112	+				+0.7
4,871,112	+				+1.3
4,871,112	+				-2.1
4,871,113	-				-0.3
4,871,113	-				-1.1
4,871,113	-				-0.1
4,871,113	-				+0.3
4,871,113	-				-0.2
4,871,113	-				+1.4
4,871,113	-				+0.7
4,871,113	-				-1.8
4,871,124	+				-0.6
4,871,125	-				+0.7
4,871,154	+				+1.4
4,871,154	+				-0.1
4,871,154	+				-0.1
4,871,154	+				+1.3
4,871,154	+				+0.1
4,871,154	+				-0.2
4,871,154	+				+1.2
4,871,154	+				+0.5
4,871,154	+				+0.9
4,871,154	+				-0.1
4,871,154	+				+1.6
4,871,155	-				+0.2
4,871,155	-				+1.0
4,871,155	-				+0.9
4,871,155	-				+0.1
4,871,155	-				+2.2
4,871,155	-				-0.3
4,871,155	-				-0.6
4,871,155	-				+0.6
4,871,160	+				+1.2
4,871,160	+				-1.4
4,871,161	-				+0.2
4,871,184	-				-0.1
4,871,213	+				+0.7
4,871,310	-				-0.4
4,871,311	+				-0.4
4,871,312	-				-1.1
4,871,312	-				+0.9
4,871,312	-				-0.6
4,871,312	-				+0.5
4,871,330	+				-0.3
4,871,330	+				+0.0
4,871,331	-				-1.9
4,871,372	-				+0.6
4,871,375	+				+0.4
4,871,375	+				+0.8
4,871,376	-				-0.6
4,871,376	-				+1.9
4,871,376	-				+2.5
4,871,376	-				+0.5
4,871,376	-				+0.1
4,871,386	-				+0.6
4,871,386	-				+1.9
4,871,405	+				-1.9
4,871,405	+				-1.0
4,871,406	-				-0.8
4,871,411	+				+0.9
4,871,411	+				+0.9
4,871,411	+				+0.4
4,871,411	+				-0.5
4,871,412	-				+0.7
4,871,413	+				-0.1
4,871,416	-				-1.9
4,871,432	+				+0.4
4,871,433	-				-3.1
4,871,433	-				-1.2
4,871,451	+				-0.1
4,871,452	-				+0.1
4,871,452	-				+0.5
4,871,472	+				+1.7
4,871,473	-				-0.7
4,871,473	-				-0.4
4,871,497	-				+0.2
4,871,504	+				+0.9
4,871,518	+				-1.4
4,871,518	+				+0.9
4,871,518	+				-0.6
4,871,520	+				+0.9
4,871,521	-				-0.6
4,871,526	+				-0.3
4,871,526	+				+2.0
4,871,526	+				-0.8
4,871,526	+				+0.6
4,871,527	-				+0.2
4,871,527	-				-0.4
4,871,527	-				-0.3
4,871,527	-				-1.1
4,871,527	-				+0.5
4,871,532	+				-1.0
4,871,532	+				+0.1
4,871,532	+				-1.2
4,871,532	+				-0.1
4,871,532	+				+0.4
4,871,532	+				+1.4
4,871,532	+				-1.9
4,871,555	+				-1.6
4,871,555	+				+0.4
4,871,605	+				-1.1
4,871,606	-				-0.9
4,871,606	-				+1.3
4,871,611	+				-1.3
4,871,611	+				+1.3
4,871,637	-				+0.2
4,871,637	-				+0.4
4,871,642	+				+0.3
4,871,643	-				-0.1
4,871,648	+				+0.8
4,871,649	-				-1.4
4,871,663	+				-0.7
4,871,700	-		DZA65_RS22525	0.11	+0.9
4,871,700	-		DZA65_RS22525	0.11	-1.9
4,871,700	-		DZA65_RS22525	0.11	-0.7
4,871,756	+		DZA65_RS22525	0.15	-1.2
4,871,756	+		DZA65_RS22525	0.15	+0.2
4,871,756	+		DZA65_RS22525	0.15	-0.4
4,871,756	+		DZA65_RS22525	0.15	-1.9
4,871,756	+		DZA65_RS22525	0.15	-2.1
4,871,756	+		DZA65_RS22525	0.15	+0.7
4,871,756	+		DZA65_RS22525	0.15	+0.8
4,871,756	+		DZA65_RS22525	0.15	-1.3
4,871,757	-		DZA65_RS22525	0.15	-0.3
4,871,757	-		DZA65_RS22525	0.15	+1.3
4,871,757	-		DZA65_RS22525	0.15	-1.9
4,871,757	-		DZA65_RS22525	0.15	-1.1
4,871,757	-		DZA65_RS22525	0.15	+0.4
4,871,757	-		DZA65_RS22525	0.15	+0.4
4,871,757	-		DZA65_RS22525	0.15	+0.5
4,871,759	+		DZA65_RS22525	0.15	+0.6
4,871,759	+		DZA65_RS22525	0.15	+0.5
4,871,760	-		DZA65_RS22525	0.16	-1.2
4,871,760	-		DZA65_RS22525	0.16	+0.5
4,871,760	-		DZA65_RS22525	0.16	+0.9
4,871,801	+		DZA65_RS22525	0.18	-0.3
4,871,802	-		DZA65_RS22525	0.18	-3.3
4,871,802	-		DZA65_RS22525	0.18	+1.1
4,871,802	-		DZA65_RS22525	0.18	-1.1
4,871,823	+		DZA65_RS22525	0.20	-0.1
4,871,879	-		DZA65_RS22525	0.24	-0.1
4,871,881	+		DZA65_RS22525	0.24	+0.3
4,871,881	+		DZA65_RS22525	0.24	-0.8
4,871,882	-		DZA65_RS22525	0.24	+1.7
4,871,882	-		DZA65_RS22525	0.24	-0.1
4,871,901	+		DZA65_RS22525	0.25	-2.5
4,871,902	-		DZA65_RS22525	0.25	+0.2
4,871,905	+		DZA65_RS22525	0.26	-0.1
4,871,906	-		DZA65_RS22525	0.26	+0.6
4,871,906	-		DZA65_RS22525	0.26	+1.3
4,871,906	-		DZA65_RS22525	0.26	+1.1
4,871,906	-		DZA65_RS22525	0.26	-0.6
4,871,906	-		DZA65_RS22525	0.26	-0.4
4,871,907	+		DZA65_RS22525	0.26	-1.4
4,871,907	+		DZA65_RS22525	0.26	-1.0
4,871,907	+		DZA65_RS22525	0.26	+0.4
4,871,908	-		DZA65_RS22525	0.26	-0.8
4,871,908	-		DZA65_RS22525	0.26	+0.6
4,871,908	-		DZA65_RS22525	0.26	+2.5
4,871,948	+		DZA65_RS22525	0.29	+0.9
4,871,951	-		DZA65_RS22525	0.29	+2.2
4,871,951	-		DZA65_RS22525	0.29	+0.9
4,871,951	-		DZA65_RS22525	0.29	-0.4
4,871,951	-		DZA65_RS22525	0.29	+0.9
4,871,951	-		DZA65_RS22525	0.29	+1.7
4,871,957	+		DZA65_RS22525	0.29	-1.4
4,872,018	+		DZA65_RS22525	0.33	+3.2
4,872,018	+		DZA65_RS22525	0.33	+0.6
4,872,018	+		DZA65_RS22525	0.33	-1.1
4,872,018	+		DZA65_RS22525	0.33	-1.6
4,872,018	+		DZA65_RS22525	0.33	-2.4
4,872,019	-		DZA65_RS22525	0.34	+0.5
4,872,019	-		DZA65_RS22525	0.34	-1.2
4,872,019	-		DZA65_RS22525	0.34	+0.1
4,872,019	-		DZA65_RS22525	0.34	-0.6
4,872,104	+		DZA65_RS22525	0.39	-0.6
4,872,104	+		DZA65_RS22525	0.39	-1.6
4,872,104	+		DZA65_RS22525	0.39	+0.2
4,872,104	+		DZA65_RS22525	0.39	-0.1
4,872,104	+		DZA65_RS22525	0.39	-0.4
4,872,104	+		DZA65_RS22525	0.39	-1.8
4,872,104	+		DZA65_RS22525	0.39	+0.2
4,872,104	+		DZA65_RS22525	0.39	-0.8
4,872,105	-		DZA65_RS22525	0.40	+0.5
4,872,105	-		DZA65_RS22525	0.40	+0.2
4,872,105	-		DZA65_RS22525	0.40	-0.1
4,872,105	-		DZA65_RS22525	0.40	-0.6
4,872,105	-		DZA65_RS22525	0.40	+0.9
4,872,105	-		DZA65_RS22525	0.40	-0.6
4,872,105	-		DZA65_RS22525	0.40	+1.3
4,872,105	-		DZA65_RS22525	0.40	-0.1
4,872,105	-		DZA65_RS22525	0.40	+0.2
4,872,105	-		DZA65_RS22525	0.40	-0.5
4,872,151	+		DZA65_RS22525	0.43	-2.4
4,872,151	+		DZA65_RS22525	0.43	+0.1
4,872,151	+		DZA65_RS22525	0.43	-1.8
4,872,151	+		DZA65_RS22525	0.43	+1.7
4,872,151	+		DZA65_RS22525	0.43	-1.1
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4,872,879	+				-0.4
4,872,879	+				+0.8
4,872,879	+				+1.1
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4,872,880	-				-1.2
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4,872,940	-				-1.9
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4,873,017	+				-1.1
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4,873,600	+		DZA65_RS22530	0.48	-1.1
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4,873,636	+		DZA65_RS22530	0.51	-1.1
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4,873,972	+		DZA65_RS22530	0.77	+1.1
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4,873,973	-		DZA65_RS22530	0.77	+1.9
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