Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22310

Experiment: Stem-Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Atlantic
4,824,498	+				+1.1
4,824,526	+				-0.9
4,824,527	-				-1.8
4,824,527	-				+0.7
4,824,527	-				-2.1
4,824,530	+				-0.3
4,824,530	+				+1.4
4,824,530	+				-1.1
4,824,530	+				+0.6
4,824,531	-				-0.2
4,824,531	-				+0.3
4,824,542	+				+0.0
4,824,542	+				-0.8
4,824,542	+				+1.5
4,824,542	+				-3.0
4,824,542	+				+0.1
4,824,543	-				+0.8
4,824,543	-				-1.8
4,824,543	-				-1.2
4,824,543	-				+0.7
4,824,546	+				+0.4
4,824,547	-				-0.1
4,824,547	-				-0.8
4,824,547	-				-1.8
4,824,547	-				-2.1
4,824,566	+				+0.6
4,824,567	-				-0.3
4,824,592	+				+0.5
4,824,592	+				-0.6
4,824,592	+				+1.5
4,824,592	+				-1.9
4,824,592	+				+1.1
4,824,592	+				-0.9
4,824,593	-				-0.3
4,824,593	-				+0.2
4,824,593	-				-0.2
4,824,593	-				+0.3
4,824,595	+				+0.9
4,824,595	+				-0.5
4,824,595	+				-1.1
4,824,595	+				-0.1
4,824,595	+				+0.9
4,824,595	+				+0.2
4,824,595	+				+0.9
4,824,596	-				+0.9
4,824,596	-				-0.3
4,824,596	-				+0.4
4,824,596	-				+1.4
4,824,609	+				-1.6
4,824,609	+				-1.1
4,824,617	+				+0.7
4,824,617	+				+1.5
4,824,617	+				-0.4
4,824,617	+				+0.6
4,824,618	-				+0.2
4,824,618	-				+0.5
4,824,618	-				+0.8
4,824,618	-				-0.4
4,824,618	-				-0.4
4,824,618	-				+0.6
4,824,618	-				+0.9
4,824,618	-				-0.1
4,824,657	+		DZA65_RS22305	0.14	+0.6
4,824,736	+		DZA65_RS22305	0.22	-1.1
4,824,789	-		DZA65_RS22305	0.27	+0.1
4,824,789	-		DZA65_RS22305	0.27	+0.5
4,824,823	+		DZA65_RS22305	0.31	+0.8
4,824,823	+		DZA65_RS22305	0.31	+1.5
4,824,824	-		DZA65_RS22305	0.31	-0.2
4,824,824	-		DZA65_RS22305	0.31	-0.2
4,824,824	-		DZA65_RS22305	0.31	+0.2
4,824,824	-		DZA65_RS22305	0.31	-1.1
4,824,842	+		DZA65_RS22305	0.33	+1.2
4,824,842	+		DZA65_RS22305	0.33	+0.9
4,824,842	+		DZA65_RS22305	0.33	-2.9
4,824,842	+		DZA65_RS22305	0.33	+1.1
4,824,842	+		DZA65_RS22305	0.33	-1.4
4,824,843	-		DZA65_RS22305	0.33	+0.2
4,824,843	-		DZA65_RS22305	0.33	+0.6
4,824,843	-		DZA65_RS22305	0.33	-2.2
4,824,843	-		DZA65_RS22305	0.33	+0.1
4,824,895	+		DZA65_RS22305	0.38	-0.5
4,824,895	+		DZA65_RS22305	0.38	-0.1
4,824,895	+		DZA65_RS22305	0.38	-0.1
4,824,896	-		DZA65_RS22305	0.38	-0.4
4,824,896	-		DZA65_RS22305	0.38	-0.8
4,824,896	-		DZA65_RS22305	0.38	-0.1
4,824,899	+		DZA65_RS22305	0.39	+0.2
4,824,899	+		DZA65_RS22305	0.39	-1.6
4,824,899	+		DZA65_RS22305	0.39	-2.9
4,824,899	+		DZA65_RS22305	0.39	+0.4
4,824,899	+		DZA65_RS22305	0.39	-0.6
4,824,899	+		DZA65_RS22305	0.39	+1.8
4,824,899	+		DZA65_RS22305	0.39	+0.9
4,824,899	+		DZA65_RS22305	0.39	+1.3
4,824,899	+		DZA65_RS22305	0.39	-1.1
4,824,899	+		DZA65_RS22305	0.39	+0.8
4,824,899	+		DZA65_RS22305	0.39	-1.1
4,824,899	+		DZA65_RS22305	0.39	+0.8
4,824,899	+		DZA65_RS22305	0.39	+0.7
4,824,899	+		DZA65_RS22305	0.39	-1.1
4,824,899	+		DZA65_RS22305	0.39	+1.5
4,824,899	+		DZA65_RS22305	0.39	+0.8
4,824,899	+		DZA65_RS22305	0.39	+0.3
4,824,899	+		DZA65_RS22305	0.39	+1.3
4,824,899	+		DZA65_RS22305	0.39	+0.9
4,824,900	-		DZA65_RS22305	0.39	+0.2
4,824,900	-		DZA65_RS22305	0.39	-2.1
4,824,900	-		DZA65_RS22305	0.39	-1.6
4,824,900	-		DZA65_RS22305	0.39	-0.7
4,824,900	-		DZA65_RS22305	0.39	-1.6
4,824,900	-		DZA65_RS22305	0.39	-0.6
4,824,900	-		DZA65_RS22305	0.39	-0.1
4,824,900	-		DZA65_RS22305	0.39	-0.6
4,824,900	-		DZA65_RS22305	0.39	-2.1
4,824,900	-		DZA65_RS22305	0.39	+0.9
4,824,900	-		DZA65_RS22305	0.39	-0.4
4,824,900	-		DZA65_RS22305	0.39	-2.4
4,824,901	+		DZA65_RS22305	0.39	+0.7
4,824,901	+		DZA65_RS22305	0.39	-2.5
4,824,902	-		DZA65_RS22305	0.39	-2.8
4,824,902	-		DZA65_RS22305	0.39	-0.3
4,824,917	+		DZA65_RS22305	0.40	+1.9
4,824,917	+		DZA65_RS22305	0.40	+2.0
4,824,917	+		DZA65_RS22305	0.40	+1.2
4,824,918	-		DZA65_RS22305	0.41	-0.1
4,824,918	-		DZA65_RS22305	0.41	-1.5
4,824,931	+		DZA65_RS22305	0.42	+2.6
4,824,931	+		DZA65_RS22305	0.42	-0.1
4,824,931	+		DZA65_RS22305	0.42	+1.7
4,824,931	+				-2.4
4,824,931	+		DZA65_RS22305	0.42	+0.5
4,824,931	+		DZA65_RS22305	0.42	+0.2
4,824,931	+		DZA65_RS22305	0.42	+0.6
4,824,931	+		DZA65_RS22305	0.42	+0.3
4,824,931	+		DZA65_RS22305	0.42	-0.6
4,824,931	+		DZA65_RS22305	0.42	-0.9
4,824,931	+		DZA65_RS22305	0.42	+0.4
4,824,931	+		DZA65_RS22305	0.42	-0.3
4,824,931	+		DZA65_RS22305	0.42	+0.4
4,824,932	-		DZA65_RS22305	0.42	-3.1
4,824,932	-		DZA65_RS22305	0.42	-0.2
4,824,932	-		DZA65_RS22305	0.42	-1.4
4,824,932	-		DZA65_RS22305	0.42	-2.1
4,824,948	+		DZA65_RS22305	0.44	+0.2
4,824,949	-				+0.2
4,824,978	+		DZA65_RS22305	0.47	-0.9
4,824,979	-		DZA65_RS22305	0.47	-1.1
4,825,062	-		DZA65_RS22305	0.55	-0.1
4,825,062	-		DZA65_RS22305	0.55	+0.5
4,825,062	-		DZA65_RS22305	0.55	+0.9
4,825,062	-		DZA65_RS22305	0.55	+0.7
4,825,063	+		DZA65_RS22305	0.56	+0.3
4,825,063	+		DZA65_RS22305	0.56	+0.9
4,825,063	+		DZA65_RS22305	0.56	+1.6
4,825,063	+		DZA65_RS22305	0.56	+0.4
4,825,063	+		DZA65_RS22305	0.56	+1.4
4,825,063	+		DZA65_RS22305	0.56	-1.4
4,825,063	+		DZA65_RS22305	0.56	-0.3
4,825,063	+		DZA65_RS22305	0.56	-0.8
4,825,063	+		DZA65_RS22305	0.56	+1.5
4,825,063	+		DZA65_RS22305	0.56	-1.4
4,825,063	+		DZA65_RS22305	0.56	-0.4
4,825,063	+		DZA65_RS22305	0.56	-1.1
4,825,063	+		DZA65_RS22305	0.56	-0.4
4,825,063	+		DZA65_RS22305	0.56	-0.9
4,825,063	+		DZA65_RS22305	0.56	-1.4
4,825,063	+		DZA65_RS22305	0.56	-0.5
4,825,063	+		DZA65_RS22305	0.56	+0.2
4,825,063	+		DZA65_RS22305	0.56	+0.7
4,825,063	+		DZA65_RS22305	0.56	+0.9
4,825,063	+		DZA65_RS22305	0.56	-0.2
4,825,063	+		DZA65_RS22305	0.56	-1.2
4,825,063	+		DZA65_RS22305	0.56	-1.1
4,825,064	-		DZA65_RS22305	0.56	-1.2
4,825,064	-				-0.6
4,825,064	-		DZA65_RS22305	0.56	-0.2
4,825,064	-		DZA65_RS22305	0.56	-1.5
4,825,064	-		DZA65_RS22305	0.56	-1.6
4,825,064	-		DZA65_RS22305	0.56	-0.5
4,825,064	-		DZA65_RS22305	0.56	-0.9
4,825,064	-		DZA65_RS22305	0.56	+0.6
4,825,064	-		DZA65_RS22305	0.56	-0.4
4,825,064	-		DZA65_RS22305	0.56	-2.5
4,825,064	-		DZA65_RS22305	0.56	-0.3
4,825,064	-		DZA65_RS22305	0.56	-2.6
4,825,064	-		DZA65_RS22305	0.56	-0.1
4,825,064	-		DZA65_RS22305	0.56	-1.4
4,825,064	-		DZA65_RS22305	0.56	+0.2
4,825,064	-		DZA65_RS22305	0.56	-1.4
4,825,064	-		DZA65_RS22305	0.56	-1.1
4,825,422	+				-1.4
4,825,478	+				+0.1
4,825,479	-				+0.8
4,825,479	-				+0.9
4,825,479	-				+0.1
4,825,502	+				+0.8
4,825,502	+				+1.7
4,825,502	+				+1.1
4,825,502	+				-1.4
4,825,502	+				+0.6
4,825,502	+				-1.6
4,825,502	+				-0.9
4,825,502	+				+0.9
4,825,502	+				+0.4
4,825,502	+				-1.3
4,825,503	-				-0.3
4,825,503	-				+0.9
4,825,503	-				+0.9
4,825,503	-				+0.4
4,825,503	-				+1.9
4,825,503	-				+0.5
4,825,503	-				-1.2
4,825,503	-				-0.4
4,825,503	-				+0.6
4,825,515	-				-0.6
4,825,521	+				-2.2
4,825,521	+				-0.5
4,825,528	+				+0.1
4,825,528	+				+0.1
4,825,529	-				+0.5
4,825,670	+		DZA65_RS22310	0.12	-0.2
4,825,671	-		DZA65_RS22310	0.12	+0.2
4,825,671	-		DZA65_RS22310	0.12	-0.4
4,825,671	-		DZA65_RS22310	0.12	-0.6
4,825,705	-		DZA65_RS22310	0.14	-2.1
4,825,751	+		DZA65_RS22310	0.17	-0.1
4,825,751	+		DZA65_RS22310	0.17	-1.2
4,825,751	+		DZA65_RS22310	0.17	+1.1
4,825,751	+		DZA65_RS22310	0.17	-0.3
4,825,751	+		DZA65_RS22310	0.17	+0.1
4,825,751	+		DZA65_RS22310	0.17	-1.1
4,825,751	+		DZA65_RS22310	0.17	+0.4
4,825,751	+		DZA65_RS22310	0.17	+0.1
4,825,752	-		DZA65_RS22310	0.17	-1.6
4,825,752	-		DZA65_RS22310	0.17	-0.2
4,825,752	-		DZA65_RS22310	0.17	+0.1
4,825,752	-		DZA65_RS22310	0.17	-1.4
4,825,752	-		DZA65_RS22310	0.17	-1.6
4,825,752	-		DZA65_RS22310	0.17	+0.3
4,825,752	-		DZA65_RS22310	0.17	-0.6
4,825,752	-		DZA65_RS22310	0.17	-0.6
4,825,752	-		DZA65_RS22310	0.17	-1.1
4,825,858	+		DZA65_RS22310	0.24	+0.5
4,825,858	+		DZA65_RS22310	0.24	-1.1
4,825,859	-		DZA65_RS22310	0.24	+0.4
4,825,861	+		DZA65_RS22310	0.24	-1.5
4,825,861	+		DZA65_RS22310	0.24	+1.5
4,825,861	+		DZA65_RS22310	0.24	-0.9
4,825,861	+		DZA65_RS22310	0.24	-1.2
4,825,861	+		DZA65_RS22310	0.24	-0.6
4,825,861	+		DZA65_RS22310	0.24	+1.5
4,825,862	-		DZA65_RS22310	0.25	-1.7
4,825,862	-		DZA65_RS22310	0.25	+0.2
4,825,862	-		DZA65_RS22310	0.25	-0.2
4,825,862	-		DZA65_RS22310	0.25	+1.6
4,825,862	-		DZA65_RS22310	0.25	-1.1
4,825,862	-				-2.1
4,825,862	-		DZA65_RS22310	0.25	+0.1
4,825,862	-		DZA65_RS22310	0.25	+1.3
4,825,935	+		DZA65_RS22310	0.29	+0.1
4,826,014	+		DZA65_RS22310	0.35	-0.6
4,826,015	-		DZA65_RS22310	0.35	-1.6
4,826,015	-		DZA65_RS22310	0.35	-1.1
4,826,016	+		DZA65_RS22310	0.35	-0.4
4,826,016	+		DZA65_RS22310	0.35	-0.6
4,826,016	+		DZA65_RS22310	0.35	-0.6
4,826,016	+		DZA65_RS22310	0.35	-0.6
4,826,016	+		DZA65_RS22310	0.35	-0.2
4,826,017	-		DZA65_RS22310	0.35	-1.6
4,826,017	-		DZA65_RS22310	0.35	+0.5
4,826,017	-		DZA65_RS22310	0.35	-0.1
4,826,050	+		DZA65_RS22310	0.37	+0.7
4,826,069	-		DZA65_RS22310	0.38	-0.3
4,826,069	-		DZA65_RS22310	0.38	-0.1
4,826,069	-		DZA65_RS22310	0.38	+0.8
4,826,134	+		DZA65_RS22310	0.42	+0.9
4,826,183	+		DZA65_RS22310	0.46	+0.4
4,826,184	-		DZA65_RS22310	0.46	+1.3
4,826,184	-		DZA65_RS22310	0.46	-1.1
4,826,271	+		DZA65_RS22310	0.51	+0.3
4,826,271	+		DZA65_RS22310	0.51	-1.6
4,826,272	-		DZA65_RS22310	0.52	-0.2
4,826,287	+		DZA65_RS22310	0.53	+0.9
4,826,287	+		DZA65_RS22310	0.53	-0.2
4,826,288	-		DZA65_RS22310	0.53	-0.8
4,826,288	-		DZA65_RS22310	0.53	-1.4
4,826,419	+		DZA65_RS22310	0.61	+0.4
4,826,419	+		DZA65_RS22310	0.61	-0.4
4,826,419	+		DZA65_RS22310	0.61	+0.3
4,826,419	+		DZA65_RS22310	0.61	-0.2
4,826,419	+		DZA65_RS22310	0.61	+2.5
4,826,419	+		DZA65_RS22310	0.61	+0.9
4,826,420	-		DZA65_RS22310	0.61	+0.7
4,826,420	-		DZA65_RS22310	0.61	-1.6
4,826,420	-		DZA65_RS22310	0.61	+0.5
4,826,420	-		DZA65_RS22310	0.61	+0.3
4,826,420	-				-0.1
4,826,420	-		DZA65_RS22310	0.61	-0.2
4,826,420	-		DZA65_RS22310	0.61	+0.3
4,826,420	-		DZA65_RS22310	0.61	-0.1
4,826,420	-		DZA65_RS22310	0.61	-0.1
4,826,420	-		DZA65_RS22310	0.61	+0.9
4,826,421	+		DZA65_RS22310	0.61	-0.4
4,826,421	+		DZA65_RS22310	0.61	-1.0
4,826,421	+		DZA65_RS22310	0.61	-0.1
4,826,421	+		DZA65_RS22310	0.61	-1.0
4,826,421	+		DZA65_RS22310	0.61	+0.4
4,826,421	+		DZA65_RS22310	0.61	-2.4
4,826,421	+		DZA65_RS22310	0.61	+0.5
4,826,421	+		DZA65_RS22310	0.61	+0.9
4,826,421	+		DZA65_RS22310	0.61	+0.1
4,826,421	+		DZA65_RS22310	0.61	-0.1
4,826,421	+		DZA65_RS22310	0.61	-2.4
4,826,421	+		DZA65_RS22310	0.61	-2.1
4,826,421	+		DZA65_RS22310	0.61	-0.1
4,826,421	+		DZA65_RS22310	0.61	-2.2
4,826,421	+		DZA65_RS22310	0.61	+0.4
4,826,421	+		DZA65_RS22310	0.61	+2.8
4,826,421	+		DZA65_RS22310	0.61	-1.4
4,826,421	+		DZA65_RS22310	0.61	+0.9
4,826,421	+		DZA65_RS22310	0.61	+0.5
4,826,421	+		DZA65_RS22310	0.61	-0.9
4,826,421	+		DZA65_RS22310	0.61	-1.4
4,826,421	+		DZA65_RS22310	0.61	-1.1
4,826,421	+		DZA65_RS22310	0.61	+0.5
4,826,421	+		DZA65_RS22310	0.61	-0.5
4,826,421	+		DZA65_RS22310	0.61	-0.9
4,826,422	-		DZA65_RS22310	0.61	-2.1
4,826,422	-		DZA65_RS22310	0.61	-0.9
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