Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10795

Experiment: Stem-Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Atlantic
2,283,765	+		DZA65_RS10785	0.79	-0.4
2,283,766	-				-0.0
2,283,884	+		DZA65_RS10785	0.85	-1.1
2,283,884	+		DZA65_RS10785	0.85	+0.4
2,283,885	-				-0.5
2,283,886	+		DZA65_RS10785	0.85	-2.2
2,283,886	+				-1.4
2,283,886	+		DZA65_RS10785	0.85	+1.6
2,283,887	-		DZA65_RS10785	0.85	-0.4
2,283,887	-		DZA65_RS10785	0.85	-0.8
2,283,887	-		DZA65_RS10785	0.85	+1.4
2,283,887	-		DZA65_RS10785	0.85	-0.2
2,283,887	-		DZA65_RS10785	0.85	-0.8
2,284,051	+				-0.6
2,284,052	-				-0.8
2,284,075	+				-3.4
2,284,076	-				-1.7
2,284,078	+				+0.5
2,284,079	-				-0.1
2,284,220	+		DZA65_RS10790	0.11	+1.8
2,284,220	+		DZA65_RS10790	0.11	-1.4
2,284,260	+		DZA65_RS10790	0.21	-0.8
2,284,261	-		DZA65_RS10790	0.21	+0.2
2,284,281	-		DZA65_RS10790	0.26	+3.6
2,284,302	+		DZA65_RS10790	0.32	-0.2
2,284,374	+		DZA65_RS10790	0.50	+0.2
2,284,460	-		DZA65_RS10790	0.71	+1.2
2,284,460	-		DZA65_RS10790	0.71	-0.6
2,284,570	+				+1.3
2,284,577	-				-0.3
2,284,577	-				-0.2
2,284,577	-				+0.5
2,284,577	-				+2.0
2,284,683	-				-0.6
2,284,683	-				-2.4
2,284,732	-		DZA65_RS10795	0.14	+0.6
2,284,939	-		DZA65_RS10795	0.40	-2.3
2,284,939	-		DZA65_RS10795	0.40	+0.9
2,284,981	-		DZA65_RS10795	0.45	+0.0
2,285,021	+		DZA65_RS10795	0.50	-0.6
2,285,021	+		DZA65_RS10795	0.50	-3.0
2,285,021	+		DZA65_RS10795	0.50	+1.0
2,285,022	-		DZA65_RS10795	0.50	-0.6
2,285,022	-		DZA65_RS10795	0.50	+1.2
2,285,039	+		DZA65_RS10795	0.52	-2.6
2,285,040	-		DZA65_RS10795	0.52	-0.6
2,285,040	-		DZA65_RS10795	0.52	+0.7
2,285,040	-		DZA65_RS10795	0.52	+0.4
2,285,154	+		DZA65_RS10795	0.66	-1.6
2,285,238	-		DZA65_RS10795	0.77	-0.8
2,285,238	-		DZA65_RS10795	0.77	+0.8
2,285,259	-		DZA65_RS10795	0.79	+0.6
2,285,304	+		DZA65_RS10795	0.85	+0.2
2,285,304	+		DZA65_RS10795	0.85	-1.8
2,285,305	-		DZA65_RS10795	0.85	+0.7
2,285,305	-		DZA65_RS10795	0.85	+0.8
2,285,305	-		DZA65_RS10795	0.85	+1.0
2,285,305	-		DZA65_RS10795	0.85	-0.8
2,285,403	+				+1.0
2,285,462	-				+0.0
2,285,494	-				+1.0
2,285,515	+				+0.8
2,285,515	+				+0.2
2,285,515	+				+1.2
2,285,515	+				-1.8
2,285,515	+				+0.7
2,285,515	+				-1.2
2,285,515	+				-0.5
2,285,516	-				+2.6
2,285,516	-				+0.9
2,285,516	-				+0.3
2,285,516	-				-1.0
2,285,516	-				-0.1
2,285,519	+				+0.2
2,285,520	-				+0.0
2,285,558	+				+1.7
2,285,559	-				-2.2
2,285,561	-				-0.8
2,285,561	-				+0.5
2,285,561	-				-1.8
2,285,592	+				+2.0
2,285,592	+				-0.2
2,285,592	+				-0.9
2,285,592	+				+0.8
2,285,592	+				+0.5
2,285,592	+				-0.8
2,285,592	+				+0.5
2,285,592	+				+0.3
2,285,592	+				-0.7
2,285,592	+				+1.5
2,285,592	+				-1.4
2,285,592	+				-0.8
2,285,592	+				+0.2
2,285,593	-				-0.6
2,285,593	-				-0.6
2,285,593	-				+0.8
2,285,593	-				+0.2
2,285,593	-				+0.4
2,285,593	-				-0.3
2,285,593	-				-1.9
2,285,593	-				+1.8
2,285,593	-				-0.8
2,285,636	-				+0.2
2,285,653	+				-0.2
2,285,653	+				+0.2
2,285,654	-				+0.5
2,285,741	+				+0.8
2,285,792	+				-0.5
2,285,792	+				-2.2
2,285,792	+				+0.2
2,285,792	+				-0.1
2,285,792	+				-3.1
2,285,792	+				-0.2
2,285,792	+				-3.0
2,285,792	+				+1.2
2,285,792	+				+0.5
2,285,792	+				-2.4
2,285,792	+				-0.3
2,285,792	+				-1.6
2,285,792	+				-1.8
2,285,792	+				+0.6
2,285,792	+				+1.8
2,285,792	+				+0.6
2,285,793	-				-0.3
2,285,793	-				-0.8
2,285,793	-				+2.3
2,285,793	-				-0.5
2,285,793	-				-0.8
2,285,793	-				+0.4
2,285,793	-				-0.4
2,285,793	-				+0.8
2,285,793	-				+0.6
2,285,793	-				-1.0
2,285,793	-				-0.1
2,285,793	-				-2.0
2,285,793	-				+0.4
2,285,793	-				+0.9
2,285,794	+				+0.5
2,285,794	+				-0.6
2,285,794	+				-0.1
2,285,794	+				-0.2
2,285,794	+				-2.4
2,285,795	-				-0.8
2,285,798	+				-2.2
2,285,798	+				-0.8
2,285,798	+				+0.7
2,285,798	+				-1.8
2,285,798	+				-3.0
2,285,798	+				-1.3
2,285,798	+				+2.2
2,285,799	-				-0.5
2,285,799	-				+0.6
2,285,799	-				+0.3
2,285,799	-				-0.2
2,285,799	-				-1.4
2,285,799	-				+1.8
2,285,799	-				-0.2
2,285,799	-				+0.1
2,285,809	+				-0.2
2,285,810	-				-2.3
2,285,810	-				+0.2
2,285,891	-		DZA65_RS10800	0.17	-1.3
2,285,940	-		DZA65_RS10800	0.25	-0.3
2,285,969	+		DZA65_RS10800	0.30	+0.8
2,285,969	+		DZA65_RS10800	0.30	-1.4
2,285,969	+		DZA65_RS10800	0.30	+0.6
2,285,969	+		DZA65_RS10800	0.30	+0.6
2,285,969	+		DZA65_RS10800	0.30	+0.6
2,285,969	+		DZA65_RS10800	0.30	-0.4
2,285,969	+		DZA65_RS10800	0.30	-0.2
2,285,970	-		DZA65_RS10800	0.30	+2.0
2,285,970	-		DZA65_RS10800	0.30	-0.8
2,285,970	-		DZA65_RS10800	0.30	-0.8
2,285,970	-		DZA65_RS10800	0.30	+0.6
2,285,970	-		DZA65_RS10800	0.30	+0.4
2,285,971	+		DZA65_RS10800	0.30	-0.8
2,285,971	+		DZA65_RS10800	0.30	+0.0
2,285,971	+		DZA65_RS10800	0.30	+2.2
2,285,972	-		DZA65_RS10800	0.30	-1.2
2,285,972	-		DZA65_RS10800	0.30	-0.8
2,285,972	-		DZA65_RS10800	0.30	+0.4
2,285,972	-		DZA65_RS10800	0.30	-0.2
2,285,972	-		DZA65_RS10800	0.30	-0.3
2,285,972	-		DZA65_RS10800	0.30	-0.7
2,285,975	+		DZA65_RS10800	0.31	-1.2
2,285,975	+		DZA65_RS10800	0.31	+0.2
2,285,975	+		DZA65_RS10800	0.31	+0.6
2,285,976	-		DZA65_RS10800	0.31	-0.8
2,285,976	-		DZA65_RS10800	0.31	-1.4
2,285,976	-		DZA65_RS10800	0.31	+0.2
2,285,976	-		DZA65_RS10800	0.31	+0.2
2,285,976	-		DZA65_RS10800	0.31	-0.8
2,285,976	-		DZA65_RS10800	0.31	+0.2
2,286,079	+		DZA65_RS10800	0.48	+0.3
2,286,079	+		DZA65_RS10800	0.48	-0.9
2,286,080	-		DZA65_RS10800	0.48	+0.2
2,286,080	-		DZA65_RS10800	0.48	+1.8
2,286,080	-		DZA65_RS10800	0.48	-0.1
2,286,080	-		DZA65_RS10800	0.48	+0.4
2,286,086	-		DZA65_RS10800	0.49	-2.2
2,286,148	+		DZA65_RS10800	0.59	-1.5
2,286,148	+		DZA65_RS10800	0.59	+0.6
2,286,148	+		DZA65_RS10800	0.59	-1.8
2,286,148	+		DZA65_RS10800	0.59	-0.2
2,286,158	-		DZA65_RS10800	0.60	+0.4
2,286,174	+		DZA65_RS10800	0.63	-1.4
2,286,181	+		DZA65_RS10800	0.64	-0.7
2,286,181	+		DZA65_RS10800	0.64	-0.6
2,286,224	+		DZA65_RS10800	0.71	-1.8
2,286,224	+		DZA65_RS10800	0.71	+0.3
2,286,224	+		DZA65_RS10800	0.71	+0.2
2,286,224	+		DZA65_RS10800	0.71	-1.3
2,286,224	+		DZA65_RS10800	0.71	+0.4
2,286,224	+		DZA65_RS10800	0.71	+1.0
2,286,225	-		DZA65_RS10800	0.71	-1.4
2,286,225	-		DZA65_RS10800	0.71	+0.2
2,286,225	-				-0.4
2,286,294	+		DZA65_RS10800	0.82	-0.6
2,286,295	-		DZA65_RS10800	0.82	+2.5
2,286,325	-		DZA65_RS10800	0.87	+1.8
2,286,377	+				+0.9
2,286,377	+				+0.7
2,286,377	+				-0.6
2,286,377	+				-3.3
2,286,377	+				+1.2
2,286,377	+				+1.8
2,286,377	+				-0.6
2,286,377	+				+0.6
2,286,377	+				+0.7
2,286,378	-				+0.4
2,286,378	-				+0.4
2,286,378	-				+0.6
2,286,378	-				-0.0
2,286,378	-				+2.2
2,286,378	-				-0.4
2,286,378	-				+2.5
2,286,379	+				-0.8
2,286,379	+				-0.4
2,286,379	+				+1.3
2,286,380	-				-0.6
2,286,380	-				-2.2
2,286,380	-				+0.2
2,286,380	-				-1.1
2,286,380	-				-0.8
2,286,401	+				-0.2
2,286,401	+				+0.5
2,286,402	-				+1.2
2,286,421	+				+1.3
2,286,422	-				+0.6