Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08660

Experiment: Stem-Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Atlantic
1,832,138	+				+0.3
1,832,138	+				+0.3
1,832,139	-				+1.0
1,832,139	-				+0.0
1,832,139	-				-2.3
1,832,139	-				+1.3
1,832,139	-				-0.3
1,832,139	-				+0.0
1,832,139	-				+0.3
1,832,148	+				+1.0
1,832,148	+				+1.0
1,832,205	+				+0.7
1,832,205	+				+0.3
1,832,206	-				-0.4
1,832,246	+				+0.3
1,832,246	+				+1.3
1,832,247	-				-1.0
1,832,247	-				-1.3
1,832,318	+				-0.5
1,832,318	+				-0.8
1,832,319	-				+0.5
1,832,327	-				-1.7
1,832,504	+		DZA65_RS08655	0.29	+1.1
1,832,603	-				-1.3
1,832,680	+		DZA65_RS08655	0.54	-0.0
1,832,680	+		DZA65_RS08655	0.54	+0.6
1,832,680	+		DZA65_RS08655	0.54	-0.7
1,832,680	+		DZA65_RS08655	0.54	-0.6
1,832,681	-		DZA65_RS08655	0.54	+0.9
1,832,681	-		DZA65_RS08655	0.54	-3.0
1,832,681	-		DZA65_RS08655	0.54	+0.3
1,832,681	-		DZA65_RS08655	0.54	-1.1
1,832,790	+		DZA65_RS08655	0.70	-0.6
1,832,808	+		DZA65_RS08655	0.72	-1.9
1,832,877	+		DZA65_RS08655	0.82	+1.3
1,832,877	+		DZA65_RS08655	0.82	+0.5
1,832,877	+		DZA65_RS08655	0.82	-0.6
1,832,878	-		DZA65_RS08655	0.82	+0.5
1,833,000	+				+0.9
1,833,001	-				+0.9
1,833,204	+		DZA65_RS08660	0.14	+0.7
1,833,205	-		DZA65_RS08660	0.14	-1.2
1,833,205	-		DZA65_RS08660	0.14	+0.3
1,833,247	+		DZA65_RS08660	0.17	-3.2
1,833,248	-		DZA65_RS08660	0.17	+0.4
1,833,248	-		DZA65_RS08660	0.17	-0.1
1,833,417	+		DZA65_RS08660	0.29	+0.3
1,833,417	+		DZA65_RS08660	0.29	+1.3
1,833,767	-		DZA65_RS08660	0.54	+1.4
1,833,808	+		DZA65_RS08660	0.57	+0.7
1,833,808	+		DZA65_RS08660	0.57	+0.1
1,833,809	-		DZA65_RS08660	0.57	+0.4
1,833,809	-		DZA65_RS08660	0.57	-0.1
1,833,865	+		DZA65_RS08660	0.61	+0.2
1,833,866	-		DZA65_RS08660	0.61	-0.0
1,833,903	+		DZA65_RS08660	0.63	-0.7
1,834,005	+		DZA65_RS08660	0.70	-0.4
1,834,005	+		DZA65_RS08660	0.70	+1.0
1,834,005	+		DZA65_RS08660	0.70	+0.7
1,834,005	+		DZA65_RS08660	0.70	+1.3
1,834,005	+		DZA65_RS08660	0.70	+2.5
1,834,005	+		DZA65_RS08660	0.70	-1.3
1,834,005	+		DZA65_RS08660	0.70	+0.0
1,834,005	+		DZA65_RS08660	0.70	+1.5
1,834,005	+		DZA65_RS08660	0.70	-1.4
1,834,006	-		DZA65_RS08660	0.71	+0.3
1,834,006	-		DZA65_RS08660	0.71	+1.5
1,834,006	-		DZA65_RS08660	0.71	+0.6
1,834,006	-		DZA65_RS08660	0.71	+0.1
1,834,006	-		DZA65_RS08660	0.71	-0.7
1,834,006	-		DZA65_RS08660	0.71	+0.2
1,834,084	+		DZA65_RS08660	0.76	+0.0
1,834,084	+		DZA65_RS08660	0.76	+0.1
1,834,085	-		DZA65_RS08660	0.76	-0.1
1,834,085	-		DZA65_RS08660	0.76	+0.6
1,834,085	-		DZA65_RS08660	0.76	-1.7
1,834,085	-		DZA65_RS08660	0.76	-0.4
1,834,085	-		DZA65_RS08660	0.76	+0.4
1,834,085	-		DZA65_RS08660	0.76	-1.2
1,834,085	-		DZA65_RS08660	0.76	+1.1
1,834,085	-		DZA65_RS08660	0.76	-1.0
1,834,127	+		DZA65_RS08660	0.79	-0.1
1,834,138	+		DZA65_RS08660	0.80	+0.3
1,834,138	+		DZA65_RS08660	0.80	+0.7
1,834,138	+		DZA65_RS08660	0.80	+0.1
1,834,138	+		DZA65_RS08660	0.80	-0.7
1,834,138	+		DZA65_RS08660	0.80	-0.7
1,834,138	+		DZA65_RS08660	0.80	-0.8
1,834,138	+		DZA65_RS08660	0.80	+0.0
1,834,138	+		DZA65_RS08660	0.80	-1.0
1,834,138	+		DZA65_RS08660	0.80	-0.9
1,834,139	-		DZA65_RS08660	0.80	-1.1
1,834,139	-		DZA65_RS08660	0.80	-0.2
1,834,141	-		DZA65_RS08660	0.80	-0.9
1,834,141	-		DZA65_RS08660	0.80	+0.5
1,834,175	+		DZA65_RS08660	0.82	-0.1
1,834,176	-		DZA65_RS08660	0.82	+1.6
1,834,215	+		DZA65_RS08660	0.85	-1.3
1,834,215	+		DZA65_RS08660	0.85	-0.0
1,834,215	+		DZA65_RS08660	0.85	-0.3
1,834,216	-		DZA65_RS08660	0.85	+1.7
1,834,363	+				+0.3
1,834,364	-				+0.3
1,834,364	-				-0.2
1,834,364	-				+0.3
1,834,364	-				+1.6
1,834,364	-				+1.1
1,834,373	+				-1.7
1,834,374	-				-1.5
1,834,422	+				+0.7
1,834,422	+				+0.8
1,834,423	-				-1.3
1,834,423	-				-0.9
1,834,423	-				+0.3
1,834,423	-				-0.7
1,834,423	-				-0.3
1,834,546	-		DZA65_RS08665	0.15	+1.0
1,834,755	+		DZA65_RS08665	0.44	+0.6
1,834,755	+				-0.5
1,834,755	+		DZA65_RS08665	0.44	-0.2
1,834,755	+		DZA65_RS08665	0.44	-2.4
1,834,756	-		DZA65_RS08665	0.44	-0.1
1,834,756	-		DZA65_RS08665	0.44	-0.5
1,834,756	-		DZA65_RS08665	0.44	+1.0
1,834,756	-		DZA65_RS08665	0.44	-0.2
1,834,756	-		DZA65_RS08665	0.44	-1.0
1,834,896	+		DZA65_RS08665	0.64	-0.6
1,834,897	-		DZA65_RS08665	0.64	-0.4
1,835,002	+		DZA65_RS08665	0.79	+0.3
1,835,002	+		DZA65_RS08665	0.79	-1.0
1,835,004	+		DZA65_RS08665	0.79	-1.0
1,835,004	+		DZA65_RS08665	0.79	-0.1
1,835,004	+		DZA65_RS08665	0.79	-0.3
1,835,004	+		DZA65_RS08665	0.79	-3.2
1,835,004	+		DZA65_RS08665	0.79	+0.3
1,835,004	+		DZA65_RS08665	0.79	+0.3
1,835,005	-		DZA65_RS08665	0.79	+0.5
1,835,146	+				-0.7
1,835,146	+				-0.1
1,835,146	+				-1.7
1,835,163	+				+1.1
1,835,163	+				+0.6
1,835,163	+				-0.5
1,835,164	-				+0.3
1,835,164	-				-1.1
1,835,164	-				+0.9
1,835,188	+				+0.3
1,835,188	+				-0.3
1,835,188	+				+1.3
1,835,188	+				-1.7
1,835,188	+				-0.2
1,835,188	+				+1.3
1,835,188	+				+0.6
1,835,188	+				-1.0
1,835,188	+				-0.5
1,835,188	+				+1.0
1,835,189	-				-0.3
1,835,189	-				-2.5
1,835,189	-				+0.4
1,835,189	-				-1.0
1,835,279	+				-0.4
1,835,279	+				+0.3
1,835,279	+				-0.5
1,835,279	+				+1.9
1,835,279	+				+0.1
1,835,280	-				-0.9
1,835,303	-				-2.8
1,835,330	-				-0.6
1,835,356	+				-1.1