Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07460

Experiment: Stem-Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Atlantic
1,549,530	+		DZA65_RS07455	0.31	-0.6
1,549,530	+		DZA65_RS07455	0.31	-2.1
1,549,530	+		DZA65_RS07455	0.31	+0.4
1,549,530	+		DZA65_RS07455	0.31	-0.0
1,549,530	+		DZA65_RS07455	0.31	+0.7
1,549,530	+		DZA65_RS07455	0.31	-3.2
1,549,530	+		DZA65_RS07455	0.31	+0.6
1,549,530	+		DZA65_RS07455	0.31	-0.5
1,549,531	-		DZA65_RS07455	0.31	-0.2
1,549,531	-		DZA65_RS07455	0.31	+1.7
1,549,531	-		DZA65_RS07455	0.31	+0.3
1,549,531	-		DZA65_RS07455	0.31	+0.7
1,549,531	-		DZA65_RS07455	0.31	-1.2
1,549,531	-		DZA65_RS07455	0.31	+0.4
1,549,531	-		DZA65_RS07455	0.31	-1.0
1,549,531	-		DZA65_RS07455	0.31	+0.1
1,549,533	-		DZA65_RS07455	0.31	-0.6
1,549,533	-		DZA65_RS07455	0.31	+0.0
1,549,533	-		DZA65_RS07455	0.31	+1.7
1,549,594	-		DZA65_RS07455	0.37	-0.9
1,549,594	-		DZA65_RS07455	0.37	+0.9
1,549,594	-		DZA65_RS07455	0.37	+0.1
1,549,628	+		DZA65_RS07455	0.41	+0.4
1,549,667	-		DZA65_RS07455	0.45	+1.4
1,549,791	+		DZA65_RS07455	0.57	-1.7
1,549,845	+		DZA65_RS07455	0.62	-0.2
1,549,845	+		DZA65_RS07455	0.62	+2.2
1,549,846	-		DZA65_RS07455	0.63	+0.5
1,549,941	-		DZA65_RS07455	0.72	-0.3
1,549,941	-		DZA65_RS07455	0.72	+2.0
1,549,941	-		DZA65_RS07455	0.72	-0.6
1,549,947	+		DZA65_RS07455	0.73	+0.2
1,549,947	+		DZA65_RS07455	0.73	+1.0
1,549,947	+		DZA65_RS07455	0.73	-0.3
1,549,982	-		DZA65_RS07455	0.76	-0.3
1,549,994	+		DZA65_RS07455	0.77	-1.0
1,549,994	+		DZA65_RS07455	0.77	+0.8
1,549,994	+		DZA65_RS07455	0.77	+1.7
1,549,994	+		DZA65_RS07455	0.77	-2.0
1,549,994	+		DZA65_RS07455	0.77	+0.4
1,549,994	+		DZA65_RS07455	0.77	-1.8
1,549,995	-		DZA65_RS07455	0.77	-1.2
1,549,995	-		DZA65_RS07455	0.77	+1.0
1,549,995	-		DZA65_RS07455	0.77	-0.3
1,549,995	-		DZA65_RS07455	0.77	-1.0
1,549,995	-		DZA65_RS07455	0.77	+0.7
1,550,126	+				-0.2
1,550,169	+				-0.1
1,550,262	+				+0.0
1,550,263	-				+2.2
1,550,263	-				+0.1
1,550,268	-				+0.4
1,550,349	+				+0.0
1,550,361	+				+0.6
1,550,371	+				+1.4
1,550,372	-				-0.6
1,550,372	-				+0.1
1,550,379	+				-0.2
1,550,379	+				-0.9
1,550,379	+				-0.7
1,550,380	-				-1.8
1,550,380	-				-0.0
1,550,380	-				+0.8
1,550,380	-				-0.6
1,550,380	-				+0.1
1,550,409	+				+0.5
1,550,410	-				+0.0
1,550,443	+				-1.0
1,550,443	+				+1.1
1,550,443	+				+0.4
1,550,443	+				-2.0
1,550,443	+				+2.4
1,550,444	-				+0.4
1,550,444	-				+0.5
1,550,444	-				-0.3
1,550,444	-				-0.7
1,550,445	+				+0.4
1,550,446	-				+0.2
1,550,446	-				+0.5
1,550,446	-				+1.1
1,550,451	+				+0.4
1,550,451	+				-1.6
1,550,452	-				-0.0
1,550,453	+				+0.0
1,550,453	+				-0.6
1,550,453	+				-2.0
1,550,453	+				-1.2
1,550,453	+				+0.4
1,550,453	+				-0.4
1,550,454	-				+0.4
1,550,454	-				+0.8
1,550,498	+				-2.1
1,550,498	+				-3.0
1,550,498	+				-1.4
1,550,499	-				+0.5
1,550,499	-				-2.0
1,550,515	+				+1.0
1,550,527	+				+1.4
1,550,528	-				-2.8
1,550,539	+		DZA65_RS07460	0.11	+0.4
1,550,638	-		DZA65_RS07460	0.24	-1.2
1,550,638	-		DZA65_RS07460	0.24	-3.0
1,550,667	+		DZA65_RS07460	0.28	-2.0
1,550,680	+		DZA65_RS07460	0.30	-1.2
1,550,744	+		DZA65_RS07460	0.38	+0.4
1,550,788	+		DZA65_RS07460	0.44	-3.2
1,550,881	+		DZA65_RS07460	0.56	+0.0
1,550,881	+		DZA65_RS07460	0.56	-1.2
1,550,881	+		DZA65_RS07460	0.56	-3.0
1,550,881	+		DZA65_RS07460	0.56	-1.0
1,550,881	+		DZA65_RS07460	0.56	-2.2
1,550,905	+		DZA65_RS07460	0.60	-0.2
1,550,905	+		DZA65_RS07460	0.60	+0.4
1,550,905	+		DZA65_RS07460	0.60	-1.2
1,550,905	+		DZA65_RS07460	0.60	-1.6
1,550,906	-		DZA65_RS07460	0.60	+0.4
1,550,991	+		DZA65_RS07460	0.71	+0.1
1,550,995	+		DZA65_RS07460	0.72	-1.2
1,551,004	+		DZA65_RS07460	0.73	-0.6
1,551,025	-		DZA65_RS07460	0.76	-0.0
1,551,208	-				+0.4
1,551,248	-				-2.0
1,551,281	-				-0.0
1,551,319	+				-1.2
1,551,382	+		DZA65_RS07465	0.14	-1.2
1,551,382	+		DZA65_RS07465	0.14	+0.8
1,551,383	-		DZA65_RS07465	0.14	-1.0
1,551,383	-		DZA65_RS07465	0.14	-1.6
1,551,383	-		DZA65_RS07465	0.14	-2.3
1,551,386	+		DZA65_RS07465	0.14	+0.4
1,551,386	+		DZA65_RS07465	0.14	-3.0
1,551,387	-		DZA65_RS07465	0.14	+0.6
1,551,387	-		DZA65_RS07465	0.14	+1.0
1,551,438	+		DZA65_RS07465	0.18	+0.4
1,551,438	+		DZA65_RS07465	0.18	-1.6
1,551,438	+		DZA65_RS07465	0.18	+0.9
1,551,450	+		DZA65_RS07465	0.19	-4.0
1,551,450	+		DZA65_RS07465	0.19	-0.2
1,551,450	+		DZA65_RS07465	0.19	+0.4
1,551,450	+		DZA65_RS07465	0.19	-0.7
1,551,451	-		DZA65_RS07465	0.19	-1.2
1,551,451	-		DZA65_RS07465	0.19	+0.7
1,551,469	+		DZA65_RS07465	0.21	-1.0
1,551,561	+		DZA65_RS07465	0.28	+0.4
1,551,562	-		DZA65_RS07465	0.28	+0.4
1,551,605	+		DZA65_RS07465	0.31	-2.0
1,551,622	+		DZA65_RS07465	0.33	-1.9
1,551,658	+		DZA65_RS07465	0.36	-0.5
1,551,658	+		DZA65_RS07465	0.36	+0.9
1,551,658	+		DZA65_RS07465	0.36	-1.2
1,551,658	+		DZA65_RS07465	0.36	-0.6
1,551,658	+		DZA65_RS07465	0.36	-2.4
1,551,659	-		DZA65_RS07465	0.36	-0.6
1,551,659	-		DZA65_RS07465	0.36	-0.2
1,551,659	-		DZA65_RS07465	0.36	-0.1
1,551,689	-		DZA65_RS07465	0.38	-0.5
1,551,691	+		DZA65_RS07465	0.38	-1.7
1,551,691	+		DZA65_RS07465	0.38	-1.4
1,551,691	+		DZA65_RS07465	0.38	+0.4
1,551,691	+		DZA65_RS07465	0.38	-3.3
1,551,692	-		DZA65_RS07465	0.38	-2.6
1,551,692	-		DZA65_RS07465	0.38	+0.3
1,551,692	-		DZA65_RS07465	0.38	-0.9
1,551,692	-		DZA65_RS07465	0.38	-1.1
1,551,692	-		DZA65_RS07465	0.38	-1.8
1,551,692	-		DZA65_RS07465	0.38	+0.4
1,551,692	-		DZA65_RS07465	0.38	-0.6
1,551,692	-		DZA65_RS07465	0.38	+0.6
1,551,695	+		DZA65_RS07465	0.39	-0.4
1,551,695	+		DZA65_RS07465	0.39	-1.2
1,551,696	-		DZA65_RS07465	0.39	-2.4
1,551,696	-		DZA65_RS07465	0.39	+0.3
1,551,696	-		DZA65_RS07465	0.39	-1.1
1,551,696	-		DZA65_RS07465	0.39	+1.6
1,551,696	-		DZA65_RS07465	0.39	-0.4
1,551,696	-		DZA65_RS07465	0.39	-1.2
1,551,726	-		DZA65_RS07465	0.41	-0.8
1,551,726	-		DZA65_RS07465	0.41	-0.2
1,551,727	+		DZA65_RS07465	0.41	-2.4
1,551,727	+		DZA65_RS07465	0.41	-1.6
1,551,728	-		DZA65_RS07465	0.41	+0.4
1,551,728	-		DZA65_RS07465	0.41	-1.4
1,551,728	-		DZA65_RS07465	0.41	-0.1
1,551,735	-		DZA65_RS07465	0.42	-1.4
1,551,760	-		DZA65_RS07465	0.44	-1.7
1,551,766	-		DZA65_RS07465	0.44	-0.6
1,551,766	-		DZA65_RS07465	0.44	-2.9
1,551,766	-		DZA65_RS07465	0.44	-0.1
1,551,767	+		DZA65_RS07465	0.44	-0.3
1,551,767	+		DZA65_RS07465	0.44	-2.6
1,551,767	+		DZA65_RS07465	0.44	-1.2
1,551,767	+		DZA65_RS07465	0.44	-1.6
1,551,767	+		DZA65_RS07465	0.44	-1.0
1,551,768	-		DZA65_RS07465	0.44	+0.0
1,551,768	-		DZA65_RS07465	0.44	-0.1
1,551,768	-		DZA65_RS07465	0.44	-1.6
1,551,768	-		DZA65_RS07465	0.44	-0.6
1,551,768	-		DZA65_RS07465	0.44	+0.4
1,551,768	-		DZA65_RS07465	0.44	-1.3
1,551,768	-		DZA65_RS07465	0.44	+1.2
1,551,768	-		DZA65_RS07465	0.44	-2.2
1,551,771	+		DZA65_RS07465	0.45	-2.0
1,551,771	+		DZA65_RS07465	0.45	-1.0
1,551,772	-		DZA65_RS07465	0.45	+0.1
1,551,772	-		DZA65_RS07465	0.45	-0.0
1,551,772	-		DZA65_RS07465	0.45	-2.1
1,551,772	-		DZA65_RS07465	0.45	-2.4
1,551,784	+		DZA65_RS07465	0.46	-0.0
1,551,784	+				-0.2
1,551,785	-		DZA65_RS07465	0.46	+0.0
1,551,785	-		DZA65_RS07465	0.46	-1.5
1,551,785	-		DZA65_RS07465	0.46	-2.8
1,551,786	+		DZA65_RS07465	0.46	-0.6
1,551,787	-		DZA65_RS07465	0.46	+0.1
1,551,787	-		DZA65_RS07465	0.46	-2.0
1,551,871	-		DZA65_RS07465	0.53	-2.2
1,551,871	-		DZA65_RS07465	0.53	-0.7
1,551,871	-		DZA65_RS07465	0.53	+1.4
1,551,877	+		DZA65_RS07465	0.53	-1.0
1,551,878	-		DZA65_RS07465	0.53	-0.0
1,551,890	-		DZA65_RS07465	0.54	+0.0
1,551,902	+		DZA65_RS07465	0.55	-3.2
1,551,902	+		DZA65_RS07465	0.55	+1.4
1,551,903	-		DZA65_RS07465	0.55	-1.9
1,551,944	-		DZA65_RS07465	0.58	-3.1
1,551,955	-		DZA65_RS07465	0.59	-0.2
1,551,955	-		DZA65_RS07465	0.59	-0.0
1,551,957	+		DZA65_RS07465	0.59	-0.6
1,551,957	+		DZA65_RS07465	0.59	-2.6
1,551,977	-		DZA65_RS07465	0.61	-3.1
1,552,045	+		DZA65_RS07465	0.67	-1.6
1,552,046	-		DZA65_RS07465	0.67	+0.2
1,552,078	+		DZA65_RS07465	0.69	-2.4
1,552,078	+		DZA65_RS07465	0.69	-2.0
1,552,078	+		DZA65_RS07465	0.69	-1.6
1,552,079	-		DZA65_RS07465	0.69	-1.4
1,552,158	-		DZA65_RS07465	0.76	-1.2
1,552,162	+		DZA65_RS07465	0.76	-0.2
1,552,163	-		DZA65_RS07465	0.76	-1.6
1,552,163	-		DZA65_RS07465	0.76	-0.6
1,552,163	-		DZA65_RS07465	0.76	-0.4