Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19980

Experiment: Stem-Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Atlantic
4,321,145	-				-2.4
4,321,173	+				+1.1
4,321,173	+				-0.9
4,321,173	+				-1.0
4,321,173	+				+1.1
4,321,173	+				+1.7
4,321,174	-				+0.4
4,321,174	-				-2.1
4,321,174	-				-0.5
4,321,174	-				-1.9
4,321,174	-				+0.8
4,321,198	-				+0.8
4,321,364	+				-0.6
4,321,365	-				-0.3
4,321,392	+				+1.5
4,321,392	+				-0.6
4,321,413	+				-0.9
4,321,413	+				+1.4
4,321,413	+				+0.7
4,321,413	+				-0.8
4,321,413	+				+0.4
4,321,413	+				-1.2
4,321,413	+				+0.3
4,321,413	+				-1.2
4,321,413	+				+0.3
4,321,413	+				-1.2
4,321,413	+				+0.2
4,321,413	+				+0.1
4,321,413	+				+0.1
4,321,413	+				+0.3
4,321,414	-				+0.8
4,321,414	-				-1.5
4,321,414	-				+0.5
4,321,414	-				+0.2
4,321,414	-				+0.1
4,321,414	-				+0.4
4,321,414	-				+0.1
4,321,414	-				+0.6
4,321,414	-				+1.9
4,321,414	-				-1.5
4,321,414	-				-0.1
4,321,414	-				+1.6
4,321,414	-				+1.2
4,321,414	-				-0.7
4,321,414	-				+0.9
4,321,414	-				+0.1
4,321,424	-				-0.4
4,321,491	+				+0.2
4,321,501	+				+0.7
4,321,502	-				-1.5
4,321,512	+				-0.1
4,321,557	+				+1.1
4,321,557	+				+0.5
4,321,557	+				+1.7
4,321,558	-				+0.8
4,321,558	-				+0.4
4,321,558	-				+2.9
4,321,558	-				+0.5
4,321,558	-				+0.5
4,321,558	-				+0.5
4,321,558	-				-0.5
4,321,597	+				+0.7
4,321,597	+				-0.2
4,321,597	+				+0.2
4,321,598	-				+0.4
4,321,598	-				+0.3
4,321,598	-				+0.8
4,321,796	+		DZA65_RS19975	0.33	-1.2
4,321,863	+		DZA65_RS19975	0.47	+2.1
4,321,863	+		DZA65_RS19975	0.47	-0.5
4,321,864	-		DZA65_RS19975	0.47	-1.1
4,321,976	+		DZA65_RS19975	0.71	-0.5
4,321,976	+		DZA65_RS19975	0.71	-1.2
4,321,977	-		DZA65_RS19975	0.71	+1.1
4,321,977	-		DZA65_RS19975	0.71	+0.2
4,321,983	+		DZA65_RS19975	0.73	-0.1
4,321,983	+		DZA65_RS19975	0.73	+1.7
4,321,983	+		DZA65_RS19975	0.73	+0.1
4,321,984	-		DZA65_RS19975	0.73	+0.4
4,321,984	-		DZA65_RS19975	0.73	+1.1
4,322,032	-		DZA65_RS19975	0.83	+1.1
4,322,165	-				-2.7
4,322,236	+		DZA65_RS19980	0.10	-2.0
4,322,237	-		DZA65_RS19980	0.10	-0.5
4,322,279	+		DZA65_RS19980	0.13	-1.8
4,322,279	+		DZA65_RS19980	0.13	-0.7
4,322,279	+		DZA65_RS19980	0.13	+0.9
4,322,279	+		DZA65_RS19980	0.13	+0.1
4,322,352	+		DZA65_RS19980	0.18	-0.9
4,322,352	+		DZA65_RS19980	0.18	-0.1
4,322,352	+		DZA65_RS19980	0.18	-1.7
4,322,352	+		DZA65_RS19980	0.18	-2.5
4,322,352	+		DZA65_RS19980	0.18	+0.8
4,322,352	+		DZA65_RS19980	0.18	-0.9
4,322,352	+		DZA65_RS19980	0.18	-1.1
4,322,353	-		DZA65_RS19980	0.18	-1.9
4,322,353	-		DZA65_RS19980	0.18	+0.5
4,322,353	-		DZA65_RS19980	0.18	+1.1
4,322,353	-		DZA65_RS19980	0.18	-0.5
4,322,353	-		DZA65_RS19980	0.18	+0.1
4,322,353	-		DZA65_RS19980	0.18	-0.5
4,322,353	-		DZA65_RS19980	0.18	-0.3
4,322,353	-		DZA65_RS19980	0.18	+1.7
4,322,353	-		DZA65_RS19980	0.18	-0.9
4,322,353	-		DZA65_RS19980	0.18	+1.1
4,322,353	-		DZA65_RS19980	0.18	+0.2
4,322,353	-		DZA65_RS19980	0.18	+1.5
4,322,353	-		DZA65_RS19980	0.18	-0.2
4,322,403	+		DZA65_RS19980	0.22	-1.2
4,322,403	+		DZA65_RS19980	0.22	-2.1
4,322,403	+		DZA65_RS19980	0.22	-1.2
4,322,404	-		DZA65_RS19980	0.22	+3.1
4,322,561	+		DZA65_RS19980	0.33	+0.4
4,322,561	+		DZA65_RS19980	0.33	-1.5
4,322,561	+		DZA65_RS19980	0.33	+0.1
4,322,561	+		DZA65_RS19980	0.33	-0.9
4,322,561	+		DZA65_RS19980	0.33	+1.7
4,322,561	+		DZA65_RS19980	0.33	+0.6
4,322,561	+		DZA65_RS19980	0.33	+0.5
4,322,561	+		DZA65_RS19980	0.33	+0.4
4,322,561	+		DZA65_RS19980	0.33	-2.0
4,322,561	+		DZA65_RS19980	0.33	+0.1
4,322,561	+		DZA65_RS19980	0.33	-1.5
4,322,561	+		DZA65_RS19980	0.33	+0.1
4,322,561	+		DZA65_RS19980	0.33	-1.0
4,322,561	+		DZA65_RS19980	0.33	+0.1
4,322,562	-		DZA65_RS19980	0.34	-0.4
4,322,562	-		DZA65_RS19980	0.34	-0.6
4,322,562	-		DZA65_RS19980	0.34	+0.4
4,322,562	-		DZA65_RS19980	0.34	-1.2
4,322,562	-		DZA65_RS19980	0.34	-0.1
4,322,562	-		DZA65_RS19980	0.34	+1.1
4,322,562	-		DZA65_RS19980	0.34	+0.3
4,322,562	-		DZA65_RS19980	0.34	+0.1
4,322,562	-		DZA65_RS19980	0.34	-0.5
4,322,562	-		DZA65_RS19980	0.34	-0.9
4,322,562	-		DZA65_RS19980	0.34	+1.4
4,322,562	-		DZA65_RS19980	0.34	-1.7
4,322,562	-		DZA65_RS19980	0.34	+0.6
4,322,562	-		DZA65_RS19980	0.34	+0.6
4,322,562	-				-0.7
4,322,562	-		DZA65_RS19980	0.34	+1.6
4,322,562	-				-0.8
4,322,562	-		DZA65_RS19980	0.34	+1.1
4,322,562	-		DZA65_RS19980	0.34	-0.2
4,322,562	-		DZA65_RS19980	0.34	+1.4
4,322,562	-		DZA65_RS19980	0.34	+1.7
4,322,562	-		DZA65_RS19980	0.34	-0.1
4,322,562	-		DZA65_RS19980	0.34	+1.4
4,322,562	-		DZA65_RS19980	0.34	+0.8
4,322,562	-		DZA65_RS19980	0.34	+0.1
4,322,562	-		DZA65_RS19980	0.34	-1.7
4,322,562	-		DZA65_RS19980	0.34	-1.9
4,322,562	-		DZA65_RS19980	0.34	-1.0
4,322,727	+		DZA65_RS19980	0.45	+2.1
4,322,728	-		DZA65_RS19980	0.46	-2.5
4,322,728	-		DZA65_RS19980	0.46	+2.4
4,322,728	-		DZA65_RS19980	0.46	-0.5
4,322,728	-		DZA65_RS19980	0.46	+0.1
4,322,914	+		DZA65_RS19980	0.59	-0.5
4,322,914	+		DZA65_RS19980	0.59	-0.2
4,322,915	-		DZA65_RS19980	0.59	+1.8
4,322,915	-		DZA65_RS19980	0.59	+0.5
4,322,924	+		DZA65_RS19980	0.60	-0.3
4,322,925	-		DZA65_RS19980	0.60	-1.0
4,322,925	-		DZA65_RS19980	0.60	-0.9
4,323,067	+		DZA65_RS19980	0.70	-0.2
4,323,108	-		DZA65_RS19980	0.73	-0.3
4,323,108	-		DZA65_RS19980	0.73	+0.6
4,323,333	+		DZA65_RS19980	0.89	+3.8
4,323,333	+		DZA65_RS19980	0.89	-0.2
4,323,334	-		DZA65_RS19980	0.89	-0.4
4,323,434	+				+1.9
4,323,434	+				-0.1
4,323,434	+				-0.1
4,323,644	+		DZA65_RS19985	0.11	+0.1
4,323,644	+		DZA65_RS19985	0.11	-1.7
4,323,644	+		DZA65_RS19985	0.11	+0.2
4,323,644	+		DZA65_RS19985	0.11	+0.8
4,323,645	-		DZA65_RS19985	0.11	+1.4
4,323,645	-		DZA65_RS19985	0.11	-1.6
4,323,653	+		DZA65_RS19985	0.12	-1.9
4,323,653	+		DZA65_RS19985	0.12	-1.1
4,323,653	+		DZA65_RS19985	0.12	+0.1
4,323,653	+		DZA65_RS19985	0.12	-0.3
4,323,653	+		DZA65_RS19985	0.12	+2.1
4,323,653	+		DZA65_RS19985	0.12	+1.1
4,323,653	+		DZA65_RS19985	0.12	-2.0
4,323,653	+		DZA65_RS19985	0.12	-0.0
4,323,654	-		DZA65_RS19985	0.12	+0.7
4,323,654	-		DZA65_RS19985	0.12	+0.6
4,323,654	-		DZA65_RS19985	0.12	+0.1
4,323,654	-		DZA65_RS19985	0.12	+0.7
4,323,654	-		DZA65_RS19985	0.12	-0.2
4,323,654	-		DZA65_RS19985	0.12	+2.7
4,323,654	-		DZA65_RS19985	0.12	-2.2
4,323,654	-		DZA65_RS19985	0.12	-0.0
4,323,693	-		DZA65_RS19985	0.15	+1.6
4,323,699	-		DZA65_RS19985	0.15	-0.5
4,323,699	-		DZA65_RS19985	0.15	+0.1
4,323,699	-		DZA65_RS19985	0.15	+0.4
4,323,878	+		DZA65_RS19985	0.28	+1.1
4,323,878	+		DZA65_RS19985	0.28	+0.6
4,323,878	+		DZA65_RS19985	0.28	+0.1
4,323,878	+		DZA65_RS19985	0.28	-0.5
4,323,878	+		DZA65_RS19985	0.28	+0.3
4,323,879	-		DZA65_RS19985	0.28	+0.7
4,323,879	-		DZA65_RS19985	0.28	+0.6
4,323,879	-		DZA65_RS19985	0.28	-0.4
4,323,901	+		DZA65_RS19985	0.30	-0.2
4,324,043	+		DZA65_RS19985	0.40	-0.6
4,324,305	+		DZA65_RS19985	0.59	+1.1
4,324,306	-		DZA65_RS19985	0.59	+1.6
4,324,306	-		DZA65_RS19985	0.59	-0.1
4,324,357	+		DZA65_RS19985	0.63	+1.1
4,324,357	+		DZA65_RS19985	0.63	+2.4
4,324,358	-		DZA65_RS19985	0.63	+0.1
4,324,358	-		DZA65_RS19985	0.63	-1.2
4,324,358	-		DZA65_RS19985	0.63	+0.3
4,324,358	-		DZA65_RS19985	0.63	+0.5
4,324,358	-		DZA65_RS19985	0.63	+0.3
4,324,397	+		DZA65_RS19985	0.66	-0.5
4,324,397	+		DZA65_RS19985	0.66	-2.8