Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13285

Experiment: Stem-Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Atlantic
2,842,801	+		DZA65_RS13280	0.24	+0.7
2,842,801	+		DZA65_RS13280	0.24	-0.6
2,842,801	+		DZA65_RS13280	0.24	-0.8
2,842,801	+		DZA65_RS13280	0.24	-2.1
2,842,801	+		DZA65_RS13280	0.24	-1.1
2,842,801	+		DZA65_RS13280	0.24	+0.4
2,842,801	+		DZA65_RS13280	0.24	+0.9
2,842,801	+		DZA65_RS13280	0.24	-0.3
2,842,801	+		DZA65_RS13280	0.24	-0.1
2,842,802	-		DZA65_RS13280	0.24	-2.1
2,842,802	-		DZA65_RS13280	0.24	+0.1
2,842,802	-		DZA65_RS13280	0.24	-2.5
2,842,802	-		DZA65_RS13280	0.24	+0.3
2,842,802	-		DZA65_RS13280	0.24	+1.3
2,842,802	-		DZA65_RS13280	0.24	-0.6
2,842,802	-		DZA65_RS13280	0.24	-1.3
2,842,802	-		DZA65_RS13280	0.24	+0.3
2,842,802	-		DZA65_RS13280	0.24	+0.2
2,842,802	-		DZA65_RS13280	0.24	-0.1
2,842,805	+		DZA65_RS13280	0.24	+1.0
2,842,805	+		DZA65_RS13280	0.24	-2.3
2,842,806	-		DZA65_RS13280	0.24	+2.3
2,842,885	-		DZA65_RS13280	0.32	-1.2
2,842,900	-		DZA65_RS13280	0.34	-0.6
2,842,920	+		DZA65_RS13280	0.36	-0.9
2,842,979	+		DZA65_RS13280	0.42	-1.3
2,842,981	+		DZA65_RS13280	0.42	-0.9
2,842,981	+		DZA65_RS13280	0.42	-0.1
2,843,047	+		DZA65_RS13280	0.49	+0.3
2,843,062	-		DZA65_RS13280	0.50	+2.0
2,843,079	-		DZA65_RS13280	0.52	-1.6
2,843,158	-		DZA65_RS13280	0.60	-1.4
2,843,158	-		DZA65_RS13280	0.60	-0.3
2,843,160	+		DZA65_RS13280	0.60	+1.4
2,843,161	-		DZA65_RS13280	0.60	+0.5
2,843,203	-		DZA65_RS13280	0.65	-1.3
2,843,203	-		DZA65_RS13280	0.65	+0.3
2,843,222	+		DZA65_RS13280	0.66	-1.3
2,843,222	+		DZA65_RS13280	0.66	-0.3
2,843,222	+		DZA65_RS13280	0.66	-1.2
2,843,222	+		DZA65_RS13280	0.66	-1.6
2,843,223	-				+1.3
2,843,223	-		DZA65_RS13280	0.67	+0.3
2,843,223	-		DZA65_RS13280	0.67	+0.7
2,843,223	-		DZA65_RS13280	0.67	+0.8
2,843,223	-		DZA65_RS13280	0.67	+0.3
2,843,225	+		DZA65_RS13280	0.67	+1.1
2,843,225	+		DZA65_RS13280	0.67	+1.3
2,843,225	+		DZA65_RS13280	0.67	+0.5
2,843,225	+		DZA65_RS13280	0.67	+1.7
2,843,226	-		DZA65_RS13280	0.67	-0.9
2,843,226	-		DZA65_RS13280	0.67	-1.9
2,843,226	-		DZA65_RS13280	0.67	+0.1
2,843,328	-		DZA65_RS13280	0.77	+1.1
2,843,328	-		DZA65_RS13280	0.77	-1.3
2,843,347	-		DZA65_RS13280	0.79	+0.7
2,843,347	-		DZA65_RS13280	0.79	-0.3
2,843,426	+		DZA65_RS13280	0.87	+0.6
2,843,426	+		DZA65_RS13280	0.87	+0.0
2,843,426	+		DZA65_RS13280	0.87	-1.6
2,843,427	-		DZA65_RS13280	0.87	-1.3
2,843,427	-		DZA65_RS13280	0.87	-0.3
2,843,427	-		DZA65_RS13280	0.87	-1.6
2,843,427	-		DZA65_RS13280	0.87	-0.3
2,843,430	+		DZA65_RS13280	0.87	+0.1
2,843,430	+		DZA65_RS13280	0.87	-1.9
2,843,430	+		DZA65_RS13280	0.87	+0.9
2,843,431	-		DZA65_RS13280	0.88	-1.3
2,843,433	+		DZA65_RS13280	0.88	-0.5
2,843,434	-		DZA65_RS13280	0.88	-1.6
2,843,475	-				-0.1
2,843,475	-				+3.3
2,843,497	+				+0.7
2,843,497	+				+0.1
2,843,498	-				+0.5
2,843,498	-				-0.1
2,843,517	+				-1.3
2,843,525	-				+3.0
2,843,525	-				+0.1
2,843,538	+				-1.4
2,843,538	+				+0.9
2,843,539	-				-0.5
2,843,544	+				-0.3
2,843,544	+				+0.1
2,843,545	-				+2.1
2,843,545	-				+2.3
2,843,545	-				+1.3
2,843,545	-				+0.0
2,843,545	-				-1.1
2,843,545	-				-1.5
2,843,570	+				-1.9
2,843,570	+				-0.3
2,843,571	-				+0.3
2,843,573	+				-0.0
2,843,613	-				-1.6
2,843,613	-				-1.3
2,843,759	+				+0.7
2,843,760	-				+1.3
2,843,760	-				-0.7
2,843,760	-				+1.7
2,843,765	-				+1.4
2,843,765	-				+1.4
2,843,799	+				-1.8
2,843,799	+				-0.8
2,843,799	+				-0.9
2,843,799	+				+0.3
2,843,799	+				-1.3
2,843,799	+				+0.3
2,843,799	+				-0.9
2,843,800	-				+0.5
2,843,948	-		DZA65_RS13285	0.36	-1.4
2,844,134	+		DZA65_RS13285	0.81	-0.3
2,844,134	+		DZA65_RS13285	0.81	+0.7
2,844,134	+		DZA65_RS13285	0.81	-1.3
2,844,136	+		DZA65_RS13285	0.82	+0.4
2,844,136	+		DZA65_RS13285	0.82	-0.4
2,844,136	+		DZA65_RS13285	0.82	-2.2
2,844,136	+		DZA65_RS13285	0.82	+2.4
2,844,136	+		DZA65_RS13285	0.82	-0.9
2,844,137	-		DZA65_RS13285	0.82	-1.6
2,844,137	-		DZA65_RS13285	0.82	+0.4
2,844,137	-		DZA65_RS13285	0.82	+0.7
2,844,137	-		DZA65_RS13285	0.82	+0.1
2,844,137	-		DZA65_RS13285	0.82	+0.1
2,844,137	-		DZA65_RS13285	0.82	-0.3
2,844,142	+		DZA65_RS13285	0.83	-1.1
2,844,142	+		DZA65_RS13285	0.83	-0.3
2,844,142	+		DZA65_RS13285	0.83	+2.7
2,844,142	+		DZA65_RS13285	0.83	-0.6
2,844,142	+		DZA65_RS13285	0.83	+0.7
2,844,142	+		DZA65_RS13285	0.83	-0.1
2,844,142	+		DZA65_RS13285	0.83	-0.9
2,844,143	-		DZA65_RS13285	0.83	-0.5
2,844,143	-		DZA65_RS13285	0.83	-0.6
2,844,143	-		DZA65_RS13285	0.83	+0.4
2,844,143	-		DZA65_RS13285	0.83	+0.4
2,844,143	-		DZA65_RS13285	0.83	+0.8
2,844,143	-		DZA65_RS13285	0.83	-0.3
2,844,213	-				+0.1
2,844,213	-				-1.5
2,844,213	-				+1.7
2,844,217	-				+0.2
2,844,217	-				-0.1
2,844,217	-				-1.9
2,844,246	+				-0.3
2,844,332	+				-0.3
2,844,332	+				+0.3
2,844,332	+				+0.7
2,844,332	+				-1.1
2,844,332	+				+0.8
2,844,332	+				+1.1
2,844,332	+				+0.7
2,844,332	+				+0.3
2,844,332	+				-0.3
2,844,332	+				+1.3
2,844,332	+				+1.4
2,844,332	+				+1.0
2,844,332	+				+1.3
2,844,333	-				-0.6
2,844,333	-				-1.6
2,844,333	-				+1.7
2,844,333	-				+0.7
2,844,333	-				-1.3
2,844,333	-				-0.5
2,844,333	-				-1.1
2,844,333	-				-0.3
2,844,333	-				-1.3
2,844,333	-				-0.3
2,844,333	-				+0.2
2,844,333	-				+0.7
2,844,333	-				+0.1
2,844,333	-				+0.7
2,844,334	+				-2.9
2,844,335	-				+1.7
2,844,335	-				-0.9
2,844,335	-				+2.0
2,844,381	+				+0.8
2,844,381	+				+0.0
2,844,381	+				-0.9
2,844,421	-				+1.5
2,844,421	-				-0.3
2,844,475	-		DZA65_RS13290	0.13	-0.1
2,844,559	-		DZA65_RS13290	0.20	+0.2
2,844,600	+		DZA65_RS13290	0.23	+0.9
2,844,601	-		DZA65_RS13290	0.23	+0.8
2,844,657	+		DZA65_RS13290	0.28	+0.1
2,844,657	+		DZA65_RS13290	0.28	-2.6
2,844,657	+		DZA65_RS13290	0.28	+0.1
2,844,657	+		DZA65_RS13290	0.28	+0.7
2,844,657	+		DZA65_RS13290	0.28	-0.8
2,844,657	+		DZA65_RS13290	0.28	+1.1
2,844,657	+		DZA65_RS13290	0.28	-0.1
2,844,657	+		DZA65_RS13290	0.28	+0.7
2,844,658	-		DZA65_RS13290	0.28	-2.1
2,844,658	-		DZA65_RS13290	0.28	+1.4
2,844,658	-		DZA65_RS13290	0.28	+0.9
2,844,658	-		DZA65_RS13290	0.28	+0.8
2,844,658	-		DZA65_RS13290	0.28	-2.6
2,844,658	-		DZA65_RS13290	0.28	+0.7
2,844,735	+		DZA65_RS13290	0.34	+0.7
2,844,735	+		DZA65_RS13290	0.34	-3.6
2,844,735	+		DZA65_RS13290	0.34	-0.9
2,844,735	+		DZA65_RS13290	0.34	+1.3
2,844,735	+		DZA65_RS13290	0.34	+0.1
2,844,735	+		DZA65_RS13290	0.34	+0.7
2,844,735	+		DZA65_RS13290	0.34	-0.2
2,844,735	+		DZA65_RS13290	0.34	+0.7
2,844,736	-		DZA65_RS13290	0.34	-1.6
2,844,736	-		DZA65_RS13290	0.34	+0.5
2,844,736	-		DZA65_RS13290	0.34	+0.1
2,844,736	-		DZA65_RS13290	0.34	+0.9
2,844,736	-		DZA65_RS13290	0.34	-1.3
2,844,825	+		DZA65_RS13290	0.41	+0.1
2,844,831	-		DZA65_RS13290	0.42	-0.9
2,844,831	-		DZA65_RS13290	0.42	+1.8
2,844,852	+		DZA65_RS13290	0.44	+0.5
2,844,852	+		DZA65_RS13290	0.44	+1.3
2,844,853	-		DZA65_RS13290	0.44	-0.2
2,844,853	-		DZA65_RS13290	0.44	+1.0
2,844,853	-		DZA65_RS13290	0.44	-0.7
2,844,853	-		DZA65_RS13290	0.44	+0.7
2,844,859	+		DZA65_RS13290	0.44	+0.4
2,844,859	+		DZA65_RS13290	0.44	-0.2
2,844,877	-		DZA65_RS13290	0.46	+3.5