Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08035

Experiment: Stem-Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Atlantic
1,677,321	+				-0.9
1,677,321	+				+0.2
1,677,321	+				-1.2
1,677,321	+				+0.3
1,677,322	-				-2.5
1,677,322	-				+0.0
1,677,322	-				+0.1
1,677,324	+				-0.5
1,677,324	+				-1.4
1,677,324	+				-0.2
1,677,325	-				-0.9
1,677,332	-				-0.4
1,677,342	+				+0.6
1,677,342	+				+1.2
1,677,343	-				+0.8
1,677,343	-				+2.2
1,677,343	-				+1.4
1,677,399	+				+1.0
1,677,455	+				+0.3
1,677,455	+				-1.4
1,677,455	+				+0.6
1,677,455	+				+0.4
1,677,456	-				-2.4
1,677,456	-				+0.9
1,677,459	+				+0.1
1,677,459	+				-1.4
1,677,459	+				-2.5
1,677,459	+				-0.4
1,677,459	+				-0.7
1,677,459	+				+0.6
1,677,460	-				+1.6
1,677,460	-				+0.6
1,677,460	-				-0.0
1,677,460	-				+0.0
1,677,460	-				-0.9
1,677,538	+				+0.1
1,677,539	-				-0.7
1,677,586	+				-0.4
1,677,586	+				-0.5
1,677,587	-				+0.5
1,677,587	-				+1.5
1,677,587	-				-2.2
1,677,590	+				-1.4
1,677,590	+				-0.0
1,677,591	-				-0.4
1,677,733	+				-0.7
1,677,733	+				-2.4
1,677,733	+				-1.2
1,677,733	+				+0.6
1,677,733	+				+0.6
1,677,734	-				-1.1
1,677,734	-				-0.6
1,677,737	+				+1.2
1,677,737	+				-0.7
1,677,737	+				-0.9
1,677,737	+				+0.9
1,677,737	+				+0.6
1,677,738	-				+0.1
1,677,807	-				+0.1
1,677,934	+				+0.6
1,677,934	+				+0.6
1,677,934	+				+0.6
1,677,935	-				+0.7
1,677,935	-				-0.4
1,678,062	+				-1.2
1,678,062	+				-2.5
1,678,062	+				+0.1
1,678,067	+				-0.1
1,678,067	+				-0.9
1,678,068	-				-0.6
1,678,068	-				+1.9
1,678,084	+				+0.1
1,678,095	+				-0.6
1,678,095	+				-2.4
1,678,095	+				+1.1
1,678,165	+				-0.4
1,678,166	-				-0.2
1,678,167	+				-2.8
1,678,222	+				-0.4
1,678,235	+				+1.4
1,678,309	+		DZA65_RS08035	0.30	+0.6
1,678,340	-		DZA65_RS08035	0.40	+0.1
1,678,340	-		DZA65_RS08035	0.40	+0.2
1,678,346	+		DZA65_RS08035	0.43	+2.2
1,678,346	+		DZA65_RS08035	0.43	-1.7
1,678,346	+		DZA65_RS08035	0.43	+0.9
1,678,362	+		DZA65_RS08035	0.48	-0.9
1,678,362	+		DZA65_RS08035	0.48	+0.8
1,678,363	-		DZA65_RS08035	0.48	-2.4
1,678,408	+		DZA65_RS08035	0.64	-2.2
1,678,409	-		DZA65_RS08035	0.64	-0.2
1,678,409	-		DZA65_RS08035	0.64	-1.2
1,678,409	-		DZA65_RS08035	0.64	-1.4
1,678,409	-		DZA65_RS08035	0.64	+1.0
1,678,426	+		DZA65_RS08035	0.70	+0.1
1,678,427	-		DZA65_RS08035	0.70	+2.0
1,678,427	-		DZA65_RS08035	0.70	+1.7
1,678,488	+				-0.4
1,678,488	+				+0.6
1,678,489	-				-1.2
1,678,495	+				-1.8
1,678,495	+				+2.5
1,678,495	+				+0.8
1,678,495	+				-0.2
1,678,495	+				+0.5
1,678,495	+				+0.3
1,678,495	+				-0.0
1,678,495	+				+2.6
1,678,496	-				+1.1
1,678,496	-				+0.9
1,678,496	-				+1.6
1,678,496	-				+1.8
1,678,496	-				+0.6
1,678,496	-				-1.4
1,678,506	+				-0.9
1,678,506	+				-1.7
1,678,507	-				-0.1
1,678,507	-				-0.4
1,678,507	-				+0.1
1,678,514	+				-2.4
1,678,514	+				-2.2
1,678,514	+				+0.1
1,678,515	-				+1.6
1,678,515	-				+0.2
1,678,515	-				-0.4
1,678,515	-				-1.2
1,678,554	+				-2.2
1,678,555	-				+0.5
1,678,555	-				+0.1
1,678,564	-				-0.2
1,678,598	+				-0.5
1,678,613	-				+0.6
1,678,613	-				-0.9
1,678,613	-				+0.3
1,678,620	-				+0.8
1,678,620	-				-2.1
1,678,661	+		DZA65_RS08040	0.12	+0.3
1,678,726	+		DZA65_RS08040	0.18	+0.6
1,678,727	-		DZA65_RS08040	0.18	+0.4
1,678,760	+		DZA65_RS08040	0.21	-1.1
1,678,760	+		DZA65_RS08040	0.21	-0.3
1,678,760	+		DZA65_RS08040	0.21	+1.9
1,678,875	-		DZA65_RS08040	0.33	-0.1
1,678,911	-		DZA65_RS08040	0.36	-0.1
1,678,945	-		DZA65_RS08040	0.39	-1.9
1,679,002	+		DZA65_RS08040	0.45	-0.0
1,679,052	+		DZA65_RS08040	0.50	-0.8
1,679,172	+		DZA65_RS08040	0.62	-0.4
1,679,172	+		DZA65_RS08040	0.62	-0.9
1,679,173	-		DZA65_RS08040	0.62	-0.4
1,679,173	-		DZA65_RS08040	0.62	+1.8
1,679,173	-		DZA65_RS08040	0.62	+2.0
1,679,173	-		DZA65_RS08040	0.62	-0.9
1,679,180	+		DZA65_RS08040	0.62	+0.2
1,679,180	+		DZA65_RS08040	0.62	-0.9
1,679,180	+		DZA65_RS08040	0.62	+0.1
1,679,180	+		DZA65_RS08040	0.62	-0.9
1,679,180	+		DZA65_RS08040	0.62	+0.6
1,679,181	-		DZA65_RS08040	0.62	-0.2
1,679,181	-		DZA65_RS08040	0.62	-0.0
1,679,181	-		DZA65_RS08040	0.62	+0.6
1,679,181	-		DZA65_RS08040	0.62	+1.6
1,679,181	-		DZA65_RS08040	0.62	-1.5
1,679,181	-		DZA65_RS08040	0.62	+0.2
1,679,189	+		DZA65_RS08040	0.63	+0.4
1,679,190	-		DZA65_RS08040	0.63	-0.9
1,679,230	+		DZA65_RS08040	0.67	-0.2
1,679,231	-		DZA65_RS08040	0.67	+0.6
1,679,231	-		DZA65_RS08040	0.67	-1.9
1,679,231	-		DZA65_RS08040	0.67	-0.2
1,679,264	-		DZA65_RS08040	0.70	+0.1
1,679,285	+		DZA65_RS08040	0.73	+0.3
1,679,285	+		DZA65_RS08040	0.73	-0.4
1,679,285	+		DZA65_RS08040	0.73	+0.4
1,679,288	+		DZA65_RS08040	0.73	-1.1
1,679,288	+		DZA65_RS08040	0.73	-0.4
1,679,388	-		DZA65_RS08040	0.83	+1.6
1,679,388	-		DZA65_RS08040	0.83	-0.5
1,679,405	+		DZA65_RS08040	0.84	-0.1
1,679,405	+				-2.2
1,679,405	+		DZA65_RS08040	0.84	-0.1
1,679,405	+		DZA65_RS08040	0.84	+0.2
1,679,405	+		DZA65_RS08040	0.84	-1.4
1,679,406	-		DZA65_RS08040	0.84	-1.0
1,679,406	-		DZA65_RS08040	0.84	+0.2
1,679,406	-		DZA65_RS08040	0.84	-1.9
1,679,406	-		DZA65_RS08040	0.84	+0.6
1,679,406	-		DZA65_RS08040	0.84	-1.4
1,679,406	-		DZA65_RS08040	0.84	-1.5
1,679,406	-		DZA65_RS08040	0.84	-0.6
1,679,406	-		DZA65_RS08040	0.84	-1.4
1,679,406	-		DZA65_RS08040	0.84	-0.0
1,679,406	-		DZA65_RS08040	0.84	-1.5
1,679,406	-		DZA65_RS08040	0.84	+0.1
1,679,406	-		DZA65_RS08040	0.84	+0.8
1,679,425	+		DZA65_RS08040	0.86	+0.9