Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS02435

Experiment: Stem-Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Atlantic
524,766	-		DZA65_RS02430	0.52	-1.6
524,766	-		DZA65_RS02430	0.52	-0.9
524,814	+		DZA65_RS02430	0.55	+1.5
524,814	+		DZA65_RS02430	0.55	+2.1
524,815	-		DZA65_RS02430	0.55	-0.4
524,815	-		DZA65_RS02430	0.55	-0.9
524,815	-		DZA65_RS02430	0.55	+0.1
524,838	+		DZA65_RS02430	0.56	+0.9
524,839	-		DZA65_RS02430	0.56	-0.7
524,839	-		DZA65_RS02430	0.56	+0.7
524,862	+		DZA65_RS02430	0.58	-1.5
524,880	+		DZA65_RS02430	0.59	+0.1
524,881	-		DZA65_RS02430	0.59	+0.5
524,988	+		DZA65_RS02430	0.66	+0.5
524,988	+		DZA65_RS02430	0.66	+1.0
524,988	+		DZA65_RS02430	0.66	+1.4
524,989	-		DZA65_RS02430	0.66	+0.7
524,989	-		DZA65_RS02430	0.66	-0.5
525,008	+		DZA65_RS02430	0.67	-0.3
525,008	+		DZA65_RS02430	0.67	+0.1
525,008	+		DZA65_RS02430	0.67	-0.9
525,009	-		DZA65_RS02430	0.67	-1.5
525,012	+		DZA65_RS02430	0.67	-0.5
525,012	+		DZA65_RS02430	0.67	+0.6
525,012	+		DZA65_RS02430	0.67	+1.8
525,013	-		DZA65_RS02430	0.67	+0.1
525,013	-		DZA65_RS02430	0.67	+1.2
525,013	-		DZA65_RS02430	0.67	-2.4
525,013	-		DZA65_RS02430	0.67	+0.9
525,013	-		DZA65_RS02430	0.67	-0.3
525,013	-		DZA65_RS02430	0.67	-2.1
525,055	+		DZA65_RS02430	0.70	+1.5
525,055	+		DZA65_RS02430	0.70	+0.7
525,055	+		DZA65_RS02430	0.70	-2.7
525,055	+		DZA65_RS02430	0.70	+0.1
525,055	+		DZA65_RS02430	0.70	-0.4
525,055	+		DZA65_RS02430	0.70	-0.9
525,055	+		DZA65_RS02430	0.70	+1.1
525,055	+		DZA65_RS02430	0.70	-2.5
525,056	-		DZA65_RS02430	0.70	-1.5
525,056	-		DZA65_RS02430	0.70	-0.9
525,056	-		DZA65_RS02430	0.70	-0.7
525,056	-		DZA65_RS02430	0.70	-1.3
525,056	-		DZA65_RS02430	0.70	-0.7
525,056	-		DZA65_RS02430	0.70	-1.9
525,057	+		DZA65_RS02430	0.70	+1.6
525,057	+		DZA65_RS02430	0.70	+0.8
525,057	+		DZA65_RS02430	0.70	+0.7
525,058	-		DZA65_RS02430	0.70	+0.1
525,058	-		DZA65_RS02430	0.70	+0.9
525,058	-		DZA65_RS02430	0.70	-1.7
525,058	-		DZA65_RS02430	0.70	-0.5
525,058	-		DZA65_RS02430	0.70	-0.3
525,058	-		DZA65_RS02430	0.70	-1.3
525,094	+		DZA65_RS02430	0.72	-0.3
525,094	+		DZA65_RS02430	0.72	+0.1
525,094	+		DZA65_RS02430	0.72	-0.2
525,094	+		DZA65_RS02430	0.72	+0.7
525,094	+		DZA65_RS02430	0.72	+0.8
525,095	-		DZA65_RS02430	0.72	-0.5
525,095	-		DZA65_RS02430	0.72	+0.1
525,095	-		DZA65_RS02430	0.72	+0.3
525,127	-		DZA65_RS02430	0.74	+0.1
525,154	+		DZA65_RS02430	0.76	-1.5
525,154	+		DZA65_RS02430	0.76	+1.1
525,155	-		DZA65_RS02430	0.76	+0.1
525,155	-		DZA65_RS02430	0.76	+1.3
525,155	-		DZA65_RS02430	0.76	-1.3
525,168	+		DZA65_RS02430	0.77	-0.0
525,168	+		DZA65_RS02430	0.77	-1.5
525,169	-		DZA65_RS02430	0.77	+1.1
525,169	-		DZA65_RS02430	0.77	-1.4
525,169	-		DZA65_RS02430	0.77	-0.3
525,235	+		DZA65_RS02430	0.81	+1.3
525,235	+		DZA65_RS02430	0.81	-0.3
525,235	+		DZA65_RS02430	0.81	-1.3
525,236	-		DZA65_RS02430	0.81	+0.2
525,236	-		DZA65_RS02430	0.81	+0.9
525,236	-				+0.1
525,236	-		DZA65_RS02430	0.81	-0.5
525,236	-		DZA65_RS02430	0.81	-0.3
525,236	-		DZA65_RS02430	0.81	+0.4
525,236	-		DZA65_RS02430	0.81	+0.3
525,236	-		DZA65_RS02430	0.81	-0.3
525,236	-		DZA65_RS02430	0.81	+0.5
525,237	+		DZA65_RS02430	0.81	-0.5
525,238	-		DZA65_RS02430	0.81	-1.9
525,238	-				+1.3
525,238	-		DZA65_RS02430	0.81	-0.1
525,238	-		DZA65_RS02430	0.81	-0.5
525,286	+		DZA65_RS02430	0.84	-1.2
525,357	+		DZA65_RS02430	0.88	-0.2
525,504	-				-0.6
525,504	-				+0.3
525,566	+				+0.1
525,566	+				+0.5
525,567	-				+1.1
525,571	+				-1.5
525,571	+				-2.0
525,572	-				-2.5
525,572	-				+1.7
525,572	-				-0.8
525,572	-				-0.0
525,572	-				-0.9
525,572	-				-0.3
525,572	-				-0.5
525,572	-				-0.4
525,572	-				-0.7
525,572	-				-1.9
525,572	-				+0.1
525,572	-				+0.3
525,572	-				-0.3
525,572	-				+0.8
525,572	-				-0.5
525,572	-				-2.8
525,574	+				-1.1
525,574	+				-1.3
525,574	+				-0.7
525,574	+				-1.3
525,574	+				-0.2
525,574	+				+2.3
525,574	+				+0.4
525,574	+				-0.5
525,574	+				+0.8
525,574	+				-0.3
525,574	+				-0.6
525,574	+				+0.6
525,574	+				+0.8
525,574	+				+0.5
525,574	+				+0.5
525,575	-				+1.4
525,575	-				-2.3
525,575	-				+1.3
525,575	-				-0.5
525,575	-				+1.1
525,575	-				+0.6
525,575	-				+0.1
525,575	-				+0.6
525,575	-				-1.3
525,575	-				+0.4
525,575	-				+0.3
525,575	-				+0.1
525,575	-				+1.1
525,575	-				-0.5
525,575	-				-0.3
525,575	-				-2.7
525,577	+				+0.5
525,577	+				+0.1
525,578	-				-0.5
525,586	+				+0.1
525,586	+				+0.4
525,586	+				-1.7
525,586	+				-0.5
525,586	+				+1.1
525,586	+				+1.1
525,586	+				+0.9
525,586	+				+0.9
525,586	+				+1.1
525,586	+				+1.5
525,587	-				+0.1
525,587	-				+0.6
525,587	-				+0.7
525,587	-				-1.7
525,587	-				+0.4
525,587	-				-0.5
525,592	+				+0.8
525,592	+				+0.4
525,593	-				+1.2
525,600	+				+1.1
525,600	+				-0.3
525,601	-				+1.4
525,605	+				+0.1
525,605	+				-1.7
525,605	+				+1.5
525,605	+				-0.8
525,605	+				-0.4
525,606	-				+1.6
525,606	-				-1.0
525,655	+				-1.1
525,663	+				-1.9
525,665	+				+1.1
525,666	-				-1.9
525,666	-				+0.6
525,683	-				+1.5
525,683	-				+0.5
525,699	+				+2.6
525,699	+				+2.1
525,699	+				+0.5
525,699	+				+1.1
525,700	-				+0.2
525,700	-				+1.8
525,700	-				-0.5
525,712	+				-1.4
525,713	-				-1.9
525,713	-				-0.1
525,713	-				+0.3
525,713	-				-0.3
525,713	-				+0.4
525,741	+				+1.3
525,741	+				+0.1
525,741	+				-0.9
525,741	+				-1.5
525,741	+				-0.1
525,741	+				-1.0
525,741	+				+1.1
525,741	+				-2.4
525,741	+				-0.7
525,741	+				-0.8
525,741	+				+0.1
525,742	-				+0.4
525,742	-				-1.3
525,783	+				+0.8
525,783	+				+0.9
525,784	-				-1.1
525,784	-				+0.6
525,797	+				-1.3
525,797	+				+0.8
525,797	+				+0.5
525,797	+				+0.5
525,797	+				+0.3
525,797	+				-1.3
525,798	-				+0.3
525,798	-				-0.7
525,798	-				+0.6
526,027	+		DZA65_RS02435	0.48	-0.0
526,028	-		DZA65_RS02435	0.48	+0.4
526,034	+		DZA65_RS02435	0.49	+1.3
526,034	+		DZA65_RS02435	0.49	+1.4
526,035	-		DZA65_RS02435	0.50	+0.5
526,044	+		DZA65_RS02435	0.51	+1.4
526,051	-				-0.3
526,112	+		DZA65_RS02435	0.64	-0.3
526,112	+		DZA65_RS02435	0.64	+0.3
526,112	+		DZA65_RS02435	0.64	+0.3
526,112	+		DZA65_RS02435	0.64	-1.4
526,112	+		DZA65_RS02435	0.64	+0.4
526,112	+		DZA65_RS02435	0.64	-1.0
526,113	-		DZA65_RS02435	0.64	+0.4
526,113	-		DZA65_RS02435	0.64	+0.5
526,113	-		DZA65_RS02435	0.64	+0.1
526,156	+		DZA65_RS02435	0.72	+2.3
526,156	+		DZA65_RS02435	0.72	+2.9
526,157	-		DZA65_RS02435	0.72	-1.3
526,157	-		DZA65_RS02435	0.72	-0.8
526,157	-		DZA65_RS02435	0.72	-0.9
526,157	-		DZA65_RS02435	0.72	-0.1
526,157	-		DZA65_RS02435	0.72	+0.1
526,157	-		DZA65_RS02435	0.72	-0.9
526,255	-				-1.3
526,276	+				-1.5
526,503	+				+1.1
526,506	+				-0.3
526,507	-				-0.7
526,573	+				-0.3
526,577	+				-1.6
526,591	-				+0.2
526,599	+				+0.4
526,600	-				-0.5
526,644	+				-2.1
526,702	-				-0.2
526,802	+				+0.3
526,803	-				+1.1
526,830	-				+1.1
526,831	+				+1.2
526,831	+				-0.9
526,831	+				-1.1
526,832	-				+1.1
526,922	+				+1.2
526,923	-				+0.9
526,923	-				-0.1
526,923	-				+3.2
526,923	-				+0.6
526,923	-				-0.5
526,924	+				-0.6
526,925	-				+3.4
526,967	+				+2.5
526,967	+				+0.1
526,967	+				+0.8
526,967	+				+0.8
526,968	-				-0.5
526,969	+				+0.1
526,969	+				-1.8
526,969	+				-0.9
526,969	+				+0.6
526,969	+				+0.5
526,970	-				+0.3
526,970	-				-0.5
526,973	+				+0.3
526,973	+				-1.4
526,973	+				+0.5
526,973	+				+1.3
526,974	-				-1.3
526,974	-				-0.9
526,974	-				+0.3
526,995	+				-0.3
526,996	-				-0.7
527,010	+				+0.6
527,048	-				+0.3