Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22685

Experiment: Stem-Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Atlantic
4,902,200	+				+1.0
4,902,200	+				+1.1
4,902,200	+				+2.3
4,902,200	+				+0.1
4,902,201	-				-0.9
4,902,201	-				-0.5
4,902,201	-				-0.4
4,902,223	+				-2.2
4,902,223	+				-0.7
4,902,224	-				-2.0
4,902,224	-				+2.8
4,902,234	+				+0.1
4,902,234	+				-0.3
4,902,234	+				+0.9
4,902,234	+				+0.5
4,902,234	+				+0.9
4,902,234	+				-0.7
4,902,235	-				-0.5
4,902,235	-				+1.1
4,902,235	-				-0.5
4,902,235	-				+1.1
4,902,235	-				+1.5
4,902,235	-				+0.5
4,902,237	+				-1.4
4,902,237	+				+1.3
4,902,237	+				-2.8
4,902,237	+				-0.9
4,902,238	-				+1.4
4,902,238	-				+1.3
4,902,238	-				+0.1
4,902,246	+				-0.6
4,902,247	-				-0.4
4,902,247	-				+1.7
4,902,270	-				+1.6
4,902,277	+				+1.0
4,902,278	-				+1.1
4,902,328	-				-1.2
4,902,328	-				+0.0
4,902,335	-				+0.4
4,902,335	-				-0.2
4,902,349	-				+0.1
4,902,395	+				+0.1
4,902,404	+				+1.1
4,902,404	+				-2.7
4,902,404	+				-0.5
4,902,451	+				-1.0
4,902,474	+				-1.2
4,902,474	+				+0.1
4,902,474	+				+1.6
4,902,474	+				+0.3
4,902,475	-				+0.6
4,902,483	+				-0.2
4,902,483	+				+0.9
4,902,483	+				-1.2
4,902,483	+				+1.1
4,902,484	-				+0.5
4,902,484	-				+0.1
4,902,484	-				-0.2
4,902,484	-				-3.1
4,902,487	+				+1.9
4,902,487	+				-1.2
4,902,487	+				-0.5
4,902,487	+				-2.2
4,902,487	+				+2.5
4,902,487	+				-0.3
4,902,487	+				+0.6
4,902,487	+				+0.3
4,902,487	+				+0.3
4,902,488	-				-0.5
4,902,488	-				+0.8
4,902,488	-				+0.3
4,902,502	+				-1.0
4,902,503	-				+0.1
4,902,503	-				-0.9
4,902,503	-				-0.2
4,902,515	+				+0.1
4,902,516	-				-1.1
4,902,516	-				-0.5
4,902,518	+				-0.3
4,902,518	+				+0.1
4,902,518	+				-1.9
4,902,518	+				-2.8
4,902,518	+				+0.9
4,902,518	+				-2.8
4,902,518	+				-0.9
4,902,519	-				+1.0
4,902,519	-				-1.2
4,902,521	+				-0.5
4,902,521	+				-0.5
4,902,557	+		DZA65_RS22680	0.11	-1.5
4,902,557	+		DZA65_RS22680	0.11	+0.9
4,902,558	-		DZA65_RS22680	0.11	+2.0
4,902,558	-		DZA65_RS22680	0.11	+1.1
4,902,558	-		DZA65_RS22680	0.11	-0.7
4,902,574	+		DZA65_RS22680	0.14	+0.5
4,902,574	+		DZA65_RS22680	0.14	-1.5
4,902,574	+		DZA65_RS22680	0.14	-0.9
4,902,574	+		DZA65_RS22680	0.14	+0.4
4,902,574	+		DZA65_RS22680	0.14	+0.4
4,902,575	-		DZA65_RS22680	0.14	-0.5
4,902,575	-		DZA65_RS22680	0.14	+2.8
4,902,575	-		DZA65_RS22680	0.14	+1.1
4,902,575	-		DZA65_RS22680	0.14	+0.1
4,902,578	+		DZA65_RS22680	0.14	-1.7
4,902,578	+		DZA65_RS22680	0.14	+1.1
4,902,578	+		DZA65_RS22680	0.14	+1.1
4,902,578	+		DZA65_RS22680	0.14	-0.2
4,902,578	+		DZA65_RS22680	0.14	-1.2
4,902,578	+		DZA65_RS22680	0.14	+1.1
4,902,578	+		DZA65_RS22680	0.14	-1.5
4,902,579	-		DZA65_RS22680	0.15	+0.7
4,902,579	-		DZA65_RS22680	0.15	-0.9
4,902,579	-		DZA65_RS22680	0.15	+0.8
4,902,579	-		DZA65_RS22680	0.15	+1.1
4,902,579	-		DZA65_RS22680	0.15	-1.5
4,902,594	+		DZA65_RS22680	0.17	-0.9
4,902,594	+		DZA65_RS22680	0.17	-1.7
4,902,594	+		DZA65_RS22680	0.17	-0.5
4,902,594	+		DZA65_RS22680	0.17	-0.9
4,902,594	+		DZA65_RS22680	0.17	+0.1
4,902,594	+		DZA65_RS22680	0.17	-0.2
4,902,594	+		DZA65_RS22680	0.17	-1.2
4,902,594	+		DZA65_RS22680	0.17	-1.9
4,902,594	+		DZA65_RS22680	0.17	+0.8
4,902,594	+		DZA65_RS22680	0.17	-0.5
4,902,595	-		DZA65_RS22680	0.17	-2.0
4,902,595	-		DZA65_RS22680	0.17	+3.9
4,902,595	-		DZA65_RS22680	0.17	-1.2
4,902,595	-		DZA65_RS22680	0.17	+1.7
4,902,595	-		DZA65_RS22680	0.17	+2.0
4,902,595	-		DZA65_RS22680	0.17	+0.8
4,902,595	-		DZA65_RS22680	0.17	+0.6
4,902,595	-		DZA65_RS22680	0.17	-0.8
4,902,595	-		DZA65_RS22680	0.17	+3.1
4,902,595	-		DZA65_RS22680	0.17	+1.1
4,902,595	-		DZA65_RS22680	0.17	-0.7
4,902,595	-		DZA65_RS22680	0.17	+2.7
4,902,595	-		DZA65_RS22680	0.17	+0.6
4,902,619	+		DZA65_RS22680	0.21	+1.3
4,902,619	+		DZA65_RS22680	0.21	-0.8
4,902,619	+		DZA65_RS22680	0.21	+0.1
4,902,619	+		DZA65_RS22680	0.21	-0.9
4,902,620	-		DZA65_RS22680	0.21	+0.1
4,902,620	-		DZA65_RS22680	0.21	-0.5
4,902,620	-		DZA65_RS22680	0.21	+2.0
4,902,620	-		DZA65_RS22680	0.21	-0.3
4,902,677	+		DZA65_RS22680	0.31	-3.0
4,902,755	-		DZA65_RS22680	0.44	-1.2
4,902,784	+		DZA65_RS22680	0.49	+0.4
4,902,785	-		DZA65_RS22680	0.49	-0.9
4,902,785	-		DZA65_RS22680	0.49	-1.3
4,902,785	-		DZA65_RS22680	0.49	+1.1
4,902,790	+		DZA65_RS22680	0.50	-1.5
4,902,790	+		DZA65_RS22680	0.50	+1.1
4,902,791	-		DZA65_RS22680	0.50	-0.6
4,902,791	-		DZA65_RS22680	0.50	-1.2
4,902,791	-		DZA65_RS22680	0.50	-2.0
4,902,791	-		DZA65_RS22680	0.50	+1.1
4,902,810	-		DZA65_RS22680	0.53	+1.1
4,902,863	+		DZA65_RS22680	0.62	-0.7
4,902,863	+		DZA65_RS22680	0.62	+1.1
4,902,864	-		DZA65_RS22680	0.62	-1.7
4,902,872	+		DZA65_RS22680	0.63	-0.4
4,902,872	+		DZA65_RS22680	0.63	+1.6
4,902,873	-		DZA65_RS22680	0.63	+0.2
4,902,888	+		DZA65_RS22680	0.66	-0.5
4,902,888	+		DZA65_RS22680	0.66	-2.3
4,902,892	+		DZA65_RS22680	0.67	+1.5
4,902,892	+		DZA65_RS22680	0.67	-0.5
4,902,892	+		DZA65_RS22680	0.67	-1.0
4,902,892	+		DZA65_RS22680	0.67	+2.1
4,902,892	+		DZA65_RS22680	0.67	-1.0
4,902,893	-		DZA65_RS22680	0.67	-1.7
4,902,893	-		DZA65_RS22680	0.67	-0.9
4,902,893	-		DZA65_RS22680	0.67	-0.3
4,902,893	-		DZA65_RS22680	0.67	+1.2
4,902,895	+		DZA65_RS22680	0.67	-0.5
4,902,896	-		DZA65_RS22680	0.67	+0.9
4,902,939	+		DZA65_RS22680	0.74	-2.0
4,902,957	-		DZA65_RS22680	0.77	-2.6
4,902,998	+		DZA65_RS22680	0.84	+1.2
4,902,998	+		DZA65_RS22680	0.84	-0.6
4,902,998	+		DZA65_RS22680	0.84	-0.1
4,902,998	+		DZA65_RS22680	0.84	+0.8
4,902,998	+		DZA65_RS22680	0.84	+1.0
4,902,998	+		DZA65_RS22680	0.84	+0.6
4,902,998	+		DZA65_RS22680	0.84	-0.2
4,902,999	-		DZA65_RS22680	0.84	+1.1
4,902,999	-		DZA65_RS22680	0.84	-2.0
4,902,999	-		DZA65_RS22680	0.84	-0.2
4,902,999	-		DZA65_RS22680	0.84	-0.9
4,902,999	-		DZA65_RS22680	0.84	+0.0
4,903,014	+		DZA65_RS22680	0.87	+0.4
4,903,014	+		DZA65_RS22680	0.87	-1.9
4,903,015	-		DZA65_RS22680	0.87	-1.5
4,903,015	-		DZA65_RS22680	0.87	-1.9
4,903,015	-		DZA65_RS22680	0.87	+2.1
4,903,028	+		DZA65_RS22680	0.89	-2.0
4,903,028	+		DZA65_RS22680	0.89	+1.1
4,903,028	+		DZA65_RS22680	0.89	-1.2
4,903,028	+		DZA65_RS22680	0.89	-2.5
4,903,028	+		DZA65_RS22680	0.89	-1.2
4,903,028	+		DZA65_RS22680	0.89	-0.4
4,903,029	-		DZA65_RS22680	0.89	+1.1
4,903,029	-		DZA65_RS22680	0.89	+2.6
4,903,029	-		DZA65_RS22680	0.89	-2.6
4,903,029	-		DZA65_RS22680	0.89	-0.0
4,903,034	+				+0.2
4,903,034	+				-0.7
4,903,034	+				+0.7
4,903,034	+				+1.4
4,903,034	+				+0.1
4,903,034	+				-0.5
4,903,035	-				-1.0
4,903,035	-				-1.2
4,903,035	-				+0.3
4,903,035	-				-0.1
4,903,035	-				+1.1
4,903,053	-				+0.1
4,903,053	-				+1.7
4,903,053	-				-0.5
4,903,053	-				+0.1
4,903,081	+				-1.7
4,903,082	-				+0.6
4,903,094	-				-0.9
4,903,096	+				-2.0
4,903,201	+				+2.1
4,903,215	+				+0.5
4,903,215	+				-1.9
4,903,215	+				-1.5
4,903,216	-				-1.5
4,903,219	+				+1.8
4,903,219	+				-1.9
4,903,219	+				+1.1
4,903,219	+				-0.1
4,903,219	+				-1.0
4,903,220	-				-1.5
4,903,220	-				+0.1
4,903,220	-				-0.3
4,903,222	+				-0.9
4,903,273	+				-2.0
4,903,273	+				-0.3
4,903,274	-				-0.5
4,903,274	-				+0.8
4,903,294	+		DZA65_RS22685	0.11	+1.3
4,903,295	-		DZA65_RS22685	0.12	+0.8
4,903,315	+		DZA65_RS22685	0.14	-1.9
4,903,315	+		DZA65_RS22685	0.14	+0.1
4,903,315	+		DZA65_RS22685	0.14	-0.2
4,903,316	-		DZA65_RS22685	0.14	-1.2
4,903,316	-		DZA65_RS22685	0.14	+2.1
4,903,316	-		DZA65_RS22685	0.14	+0.4
4,903,316	-		DZA65_RS22685	0.14	-2.5
4,903,316	-		DZA65_RS22685	0.14	+0.4
4,903,330	+		DZA65_RS22685	0.16	-0.8
4,903,330	+		DZA65_RS22685	0.16	-1.9
4,903,331	-		DZA65_RS22685	0.16	-0.7
4,903,331	-		DZA65_RS22685	0.16	-0.7
4,903,349	+		DZA65_RS22685	0.18	-1.5
4,903,349	+		DZA65_RS22685	0.18	+1.8
4,903,349	+		DZA65_RS22685	0.18	-0.5
4,903,350	-		DZA65_RS22685	0.18	+0.4
4,903,350	-		DZA65_RS22685	0.18	+1.1
4,903,350	-		DZA65_RS22685	0.18	+2.1
4,903,350	-		DZA65_RS22685	0.18	-1.1
4,903,350	-		DZA65_RS22685	0.18	-1.7
4,903,350	-		DZA65_RS22685	0.18	-0.9
4,903,350	-		DZA65_RS22685	0.18	-0.2
4,903,350	-		DZA65_RS22685	0.18	+1.0
4,903,351	+		DZA65_RS22685	0.18	+0.9
4,903,384	+		DZA65_RS22685	0.22	+1.8
4,903,429	+		DZA65_RS22685	0.27	+0.8
4,903,429	+		DZA65_RS22685	0.27	-1.9
4,903,448	-		DZA65_RS22685	0.29	+0.5
4,903,470	+		DZA65_RS22685	0.31	+0.1
4,903,470	+		DZA65_RS22685	0.31	+1.1
4,903,470	+		DZA65_RS22685	0.31	-2.0
4,903,470	+		DZA65_RS22685	0.31	-1.2
4,903,470	+		DZA65_RS22685	0.31	+0.4
4,903,470	+		DZA65_RS22685	0.31	-1.9
4,903,470	+		DZA65_RS22685	0.31	-1.2
4,903,470	+		DZA65_RS22685	0.31	+0.1
4,903,470	+		DZA65_RS22685	0.31	+2.1
4,903,470	+		DZA65_RS22685	0.31	-0.1
4,903,470	+		DZA65_RS22685	0.31	-0.8
4,903,470	+		DZA65_RS22685	0.31	-1.7
4,903,470	+		DZA65_RS22685	0.31	-2.9
4,903,470	+		DZA65_RS22685	0.31	+0.5
4,903,470	+		DZA65_RS22685	0.31	-3.0
4,903,471	-		DZA65_RS22685	0.32	-1.9
4,903,471	-		DZA65_RS22685	0.32	+1.4
4,903,471	-		DZA65_RS22685	0.32	+0.8
4,903,475	+		DZA65_RS22685	0.32	+0.9
4,903,475	+		DZA65_RS22685	0.32	+0.1
4,903,475	+		DZA65_RS22685	0.32	+1.0
4,903,475	+		DZA65_RS22685	0.32	+1.4
4,903,476	-		DZA65_RS22685	0.32	+1.1
4,903,476	-		DZA65_RS22685	0.32	+0.1
4,903,476	-		DZA65_RS22685	0.32	-1.7
4,903,476	-		DZA65_RS22685	0.32	-0.5
4,903,476	-		DZA65_RS22685	0.32	-0.9
4,903,487	-		DZA65_RS22685	0.33	-2.5
4,903,498	+		DZA65_RS22685	0.35	+2.3
4,903,498	+		DZA65_RS22685	0.35	+1.3
4,903,498	+		DZA65_RS22685	0.35	+0.4
4,903,513	+		DZA65_RS22685	0.36	+0.1
4,903,513	+		DZA65_RS22685	0.36	+0.6
4,903,514	-		DZA65_RS22685	0.36	+0.3
4,903,531	+		DZA65_RS22685	0.38	-3.6
4,903,531	+		DZA65_RS22685	0.38	-0.0
4,903,531	+		DZA65_RS22685	0.38	-2.2
4,903,532	-		DZA65_RS22685	0.38	-0.7
4,903,532	-		DZA65_RS22685	0.38	+0.5
4,903,532	-		DZA65_RS22685	0.38	-0.5
4,903,532	-		DZA65_RS22685	0.38	-0.7
4,903,532	-		DZA65_RS22685	0.38	+0.4
4,903,532	-		DZA65_RS22685	0.38	+1.9
4,903,532	-		DZA65_RS22685	0.38	+0.1
4,903,535	+		DZA65_RS22685	0.39	+1.1
4,903,535	+		DZA65_RS22685	0.39	+0.8
4,903,535	+		DZA65_RS22685	0.39	+1.1
4,903,535	+		DZA65_RS22685	0.39	+0.5
4,903,535	+		DZA65_RS22685	0.39	+0.5
4,903,535	+		DZA65_RS22685	0.39	-0.6
4,903,535	+		DZA65_RS22685	0.39	-0.7
4,903,535	+		DZA65_RS22685	0.39	+2.3
4,903,535	+		DZA65_RS22685	0.39	+0.5
4,903,535	+		DZA65_RS22685	0.39	+1.1
4,903,535	+		DZA65_RS22685	0.39	-0.2
4,903,535	+		DZA65_RS22685	0.39	-1.1
4,903,535	+		DZA65_RS22685	0.39	+1.4
4,903,535	+		DZA65_RS22685	0.39	-0.7
4,903,535	+		DZA65_RS22685	0.39	+0.1
4,903,535	+		DZA65_RS22685	0.39	+0.1
4,903,535	+		DZA65_RS22685	0.39	-0.2
4,903,536	-		DZA65_RS22685	0.39	+0.1
4,903,536	-		DZA65_RS22685	0.39	-0.2
4,903,536	-		DZA65_RS22685	0.39	+0.2
4,903,536	-		DZA65_RS22685	0.39	-0.9
4,903,536	-		DZA65_RS22685	0.39	+1.9
4,903,536	-		DZA65_RS22685	0.39	+0.3
4,903,536	-		DZA65_RS22685	0.39	+1.0
4,903,536	-		DZA65_RS22685	0.39	-2.7
4,903,536	-		DZA65_RS22685	0.39	+0.4
4,903,536	-		DZA65_RS22685	0.39	+0.9
4,903,536	-		DZA65_RS22685	0.39	-0.9
4,903,539	-		DZA65_RS22685	0.39	-1.2
4,903,539	-		DZA65_RS22685	0.39	+0.1
4,903,539	-		DZA65_RS22685	0.39	-1.7
4,903,552	+		DZA65_RS22685	0.41	+1.1
4,903,552	+		DZA65_RS22685	0.41	+0.5
4,903,552	+		DZA65_RS22685	0.41	+1.0
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