Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09775

Experiment: Stem-Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Atlantic
2,060,588	+		DZA65_RS09765	0.51	-1.3
2,060,588	+		DZA65_RS09765	0.51	+0.7
2,060,599	-		DZA65_RS09765	0.54	+2.1
2,060,684	+		DZA65_RS09765	0.77	-0.4
2,060,684	+		DZA65_RS09765	0.77	-0.7
2,060,684	+		DZA65_RS09765	0.77	-0.3
2,060,684	+		DZA65_RS09765	0.77	+0.3
2,060,684	+		DZA65_RS09765	0.77	-1.7
2,060,684	+		DZA65_RS09765	0.77	-0.1
2,060,684	+		DZA65_RS09765	0.77	+0.9
2,060,684	+		DZA65_RS09765	0.77	+0.1
2,060,684	+		DZA65_RS09765	0.77	+0.5
2,060,684	+		DZA65_RS09765	0.77	-0.5
2,060,685	-		DZA65_RS09765	0.77	-0.9
2,060,685	-		DZA65_RS09765	0.77	+0.8
2,060,685	-		DZA65_RS09765	0.77	-0.5
2,060,685	-		DZA65_RS09765	0.77	-0.1
2,060,685	-		DZA65_RS09765	0.77	-0.5
2,060,685	-		DZA65_RS09765	0.77	+1.0
2,060,685	-		DZA65_RS09765	0.77	+0.6
2,060,700	+		DZA65_RS09765	0.81	+0.0
2,060,769	-				-0.6
2,060,769	-				-1.5
2,060,785	-				+3.1
2,060,872	+				-0.5
2,060,872	+				-1.0
2,060,945	+		DZA65_RS09770	0.38	+0.7
2,060,945	+		DZA65_RS09770	0.38	-2.1
2,060,949	+		DZA65_RS09770	0.40	+2.0
2,060,950	-		DZA65_RS09770	0.40	+0.6
2,060,961	+		DZA65_RS09770	0.44	-2.1
2,061,001	+		DZA65_RS09770	0.60	+1.2
2,061,001	+		DZA65_RS09770	0.60	-1.4
2,061,001	+		DZA65_RS09770	0.60	+1.8
2,061,002	-		DZA65_RS09770	0.60	-1.1
2,061,002	-		DZA65_RS09770	0.60	+0.5
2,061,007	+		DZA65_RS09770	0.62	+0.3
2,061,008	-		DZA65_RS09770	0.62	+0.2
2,061,008	-		DZA65_RS09770	0.62	-0.3
2,061,067	+		DZA65_RS09770	0.85	-0.6
2,061,068	-		DZA65_RS09770	0.86	+0.8
2,061,068	-		DZA65_RS09770	0.86	-1.1
2,061,100	+				-0.3
2,061,100	+				-0.5
2,061,100	+				-0.5
2,061,100	+				-0.3
2,061,100	+				+1.1
2,061,100	+				+0.9
2,061,101	-				-0.5
2,061,101	-				+0.8
2,061,101	-				+0.8
2,061,101	-				-2.8
2,061,115	+				+0.3
2,061,115	+				+0.5
2,061,122	+				-1.1
2,061,122	+				+1.5
2,061,144	+				-0.2
2,061,144	+				+0.5
2,061,144	+				-1.1
2,061,167	+				-0.5
2,061,183	-				+0.4
2,061,192	-				-0.6
2,061,199	-				-1.8
2,061,217	-				+0.1
2,061,243	+				+2.1
2,061,257	-				-0.2
2,061,259	+				-1.8
2,061,259	+				+0.5
2,061,259	+				-1.2
2,061,259	+				+0.6
2,061,259	+				+1.7
2,061,259	+				-0.4
2,061,259	+				+0.0
2,061,260	-				-1.1
2,061,260	-				+1.0
2,061,260	-				+0.4
2,061,260	-				-2.1
2,061,260	-				-0.8
2,061,260	-				-2.1
2,061,304	-				-0.5
2,061,304	-				+0.5
2,061,320	+				-2.1
2,061,320	+				-0.3
2,061,320	+				-1.8
2,061,321	-				-0.2
2,061,321	-				-1.8
2,061,321	-				-0.5
2,061,339	+				+0.5
2,061,339	+				+2.3
2,061,339	+				+0.1
2,061,340	-				+0.9
2,061,340	-				+0.5
2,061,340	-				+0.9
2,061,351	-				+0.5
2,061,358	+				-1.8
2,061,358	+				+0.9
2,061,358	+				+1.7
2,061,359	-				+0.5
2,061,359	-				+0.8
2,061,359	-				+0.4
2,061,379	+				-1.4
2,061,379	+				-2.1
2,061,379	+				-0.5
2,061,379	+				+1.3
2,061,383	+				+0.5
2,061,383	+				+0.2
2,061,383	+				-0.1
2,061,383	+				-0.9
2,061,383	+				+1.5
2,061,383	+				+0.7
2,061,383	+				-0.5
2,061,384	-				+0.5
2,061,384	-				-1.8
2,061,384	-				-1.8
2,061,384	-				+1.3
2,061,384	-				+0.1
2,061,384	-				+0.1
2,061,384	-				-0.5
2,061,384	-				+0.5
2,061,384	-				+0.5
2,061,384	-				+0.5
2,061,384	-				+0.4
2,061,384	-				-2.5
2,061,384	-				+1.5
2,061,384	-				-1.4
2,061,385	+				-0.5
2,061,385	+				-2.6
2,061,385	+				-0.9
2,061,385	+				-0.3
2,061,385	+				-1.4
2,061,386	-				+0.1
2,061,386	-				+0.2
2,061,386	-				+1.0
2,061,390	+				-0.5
2,061,430	+				-1.8
2,061,430	+				-0.2
2,061,430	+				+0.8
2,061,430	+				+0.1
2,061,431	-				-0.6
2,061,431	-				+1.5
2,061,431	-				-0.5
2,061,431	-				-0.1
2,061,431	-				+0.1
2,061,431	-				-0.9
2,061,432	+				-1.0
2,061,432	+				+0.1
2,061,432	+				-0.5
2,061,432	+				+1.8
2,061,432	+				-1.8
2,061,432	+				+0.3
2,061,432	+				-1.1
2,061,432	+				+1.0
2,061,432	+				+0.3
2,061,432	+				+0.5
2,061,432	+				-0.1
2,061,432	+				-1.1
2,061,432	+				-0.5
2,061,433	-				-0.1
2,061,433	-				+1.1
2,061,433	-				+1.1
2,061,433	-				-0.1
2,061,433	-				+0.8
2,061,433	-				-0.5
2,061,433	-				-0.3
2,061,433	-				+1.2
2,061,444	-				-0.3
2,061,462	-				+2.1
2,061,462	-				-1.2
2,061,500	-				+1.3
2,061,576	+				+0.7
2,061,576	+				-0.7
2,061,577	-				-0.8
2,061,606	+				+0.2
2,061,606	+				-0.8
2,061,607	-				+0.1
2,061,607	-				+1.2
2,061,635	-				-2.6
2,061,852	-		DZA65_RS09775	0.37	+1.9
2,061,852	-		DZA65_RS09775	0.37	+1.8
2,061,990	+		DZA65_RS09775	0.56	+0.2
2,061,999	+		DZA65_RS09775	0.57	+0.7
2,062,000	-		DZA65_RS09775	0.58	+1.1
2,062,146	+		DZA65_RS09775	0.78	+0.0
2,062,157	+		DZA65_RS09775	0.79	-0.3
2,062,158	-		DZA65_RS09775	0.79	-0.5
2,062,169	-		DZA65_RS09775	0.81	-0.2
2,062,178	+		DZA65_RS09775	0.82	-1.8
2,062,178	+		DZA65_RS09775	0.82	-0.4
2,062,178	+		DZA65_RS09775	0.82	-0.5
2,062,178	+		DZA65_RS09775	0.82	+0.5
2,062,178	+		DZA65_RS09775	0.82	+0.2
2,062,178	+		DZA65_RS09775	0.82	-0.3
2,062,179	-		DZA65_RS09775	0.82	+0.6
2,062,179	-		DZA65_RS09775	0.82	-0.5
2,062,179	-		DZA65_RS09775	0.82	+0.4
2,062,179	-		DZA65_RS09775	0.82	-2.3
2,062,179	-		DZA65_RS09775	0.82	+0.3
2,062,179	-		DZA65_RS09775	0.82	-0.7
2,062,179	-		DZA65_RS09775	0.82	+0.7
2,062,179	-		DZA65_RS09775	0.82	+1.4
2,062,182	-		DZA65_RS09775	0.83	-0.2
2,062,182	-		DZA65_RS09775	0.83	+0.2
2,062,182	-				+0.9
2,062,274	+				+0.2
2,062,355	+				+1.2
2,062,356	-				+1.0
2,062,430	+		DZA65_RS09780	0.12	+1.1
2,062,430	+		DZA65_RS09780	0.12	+1.1
2,062,430	+		DZA65_RS09780	0.12	+0.2
2,062,430	+		DZA65_RS09780	0.12	+1.5
2,062,430	+		DZA65_RS09780	0.12	-1.1
2,062,431	-		DZA65_RS09780	0.12	+0.2
2,062,431	-		DZA65_RS09780	0.12	-0.5
2,062,431	-		DZA65_RS09780	0.12	+2.2
2,062,441	+		DZA65_RS09780	0.14	+1.0
2,062,441	+		DZA65_RS09780	0.14	-0.5
2,062,442	-		DZA65_RS09780	0.14	+0.9
2,062,442	-		DZA65_RS09780	0.14	-0.6
2,062,442	-		DZA65_RS09780	0.14	+0.5
2,062,490	+		DZA65_RS09780	0.19	+1.5
2,062,491	-		DZA65_RS09780	0.19	-1.5
2,062,491	-		DZA65_RS09780	0.19	+0.9
2,062,533	-		DZA65_RS09780	0.24	-2.1
2,062,533	-		DZA65_RS09780	0.24	-0.3
2,062,533	-		DZA65_RS09780	0.24	+1.4
2,062,828	+		DZA65_RS09780	0.56	+0.8
2,062,838	-		DZA65_RS09780	0.57	+1.3
2,062,853	+		DZA65_RS09780	0.59	+1.8
2,062,853	+		DZA65_RS09780	0.59	+0.6
2,062,853	+		DZA65_RS09780	0.59	+0.2
2,062,853	+		DZA65_RS09780	0.59	-0.9
2,062,853	+		DZA65_RS09780	0.59	+0.4
2,062,854	-		DZA65_RS09780	0.59	+0.9
2,062,854	-		DZA65_RS09780	0.59	-2.5
2,062,854	-		DZA65_RS09780	0.59	+2.0
2,062,873	+		DZA65_RS09780	0.61	-0.9
2,062,954	+		DZA65_RS09780	0.70	+1.3
2,062,954	+		DZA65_RS09780	0.70	-0.4
2,062,955	-		DZA65_RS09780	0.70	-0.3
2,063,062	+		DZA65_RS09780	0.82	-0.1
2,063,062	+		DZA65_RS09780	0.82	+0.8
2,063,062	+		DZA65_RS09780	0.82	-3.5
2,063,062	+		DZA65_RS09780	0.82	+3.3
2,063,062	+				-1.1
2,063,063	-		DZA65_RS09780	0.82	+0.5
2,063,063	-		DZA65_RS09780	0.82	+0.4
2,063,064	+		DZA65_RS09780	0.83	+0.0
2,063,064	+		DZA65_RS09780	0.83	+1.5
2,063,064	+		DZA65_RS09780	0.83	-1.1
2,063,064	+		DZA65_RS09780	0.83	+0.5
2,063,065	-		DZA65_RS09780	0.83	+0.7
2,063,065	-		DZA65_RS09780	0.83	+0.1
2,063,065	-		DZA65_RS09780	0.83	+0.5
2,063,065	-		DZA65_RS09780	0.83	-1.1
2,063,065	-		DZA65_RS09780	0.83	-0.2
2,063,065	-		DZA65_RS09780	0.83	+0.6
2,063,065	-		DZA65_RS09780	0.83	+0.3
2,063,065	-		DZA65_RS09780	0.83	-0.3
2,063,065	-		DZA65_RS09780	0.83	+0.6
2,063,065	-		DZA65_RS09780	0.83	-0.9
2,063,065	-		DZA65_RS09780	0.83	+0.9
2,063,065	-		DZA65_RS09780	0.83	-2.5
2,063,065	-		DZA65_RS09780	0.83	+0.5
2,063,145	+				+0.5
2,063,145	+				+0.2
2,063,145	+				-0.3
2,063,146	-				+2.6
2,063,149	+				-1.8
2,063,149	+				-1.4
2,063,149	+				+1.2
2,063,150	-				+1.0
2,063,150	-				-1.7
2,063,150	-				+0.7
2,063,150	-				+0.9
2,063,150	-				+0.4
2,063,150	-				+0.4
2,063,171	+				+0.1
2,063,171	+				-0.1
2,063,171	+				-0.5
2,063,172	-				-0.2
2,063,297	+				+1.1